Table 1.

A summary of animal alternative oxidase (AOX) sequences recovered using bioinformatics

PhylumSpeciesDatabase and identifierRelevant citation or webpage
Placozoa Trichoplax adhaerens NCBI; NZ_ABGP01000201 350281-351960 Srivastava et al., 2008
Porifera Oscarella carmela NCBI; EC370323 Nichols et al., 2006
Reniera sp.NCBI; 858481109 www.jgi.doe.gov/sequencing/why/3161.html
Cnidaria Acropora millepora NCBI; DY587694 Technau et al., 2005
Clytia hemisphaerica NCBI; CU430547Not applicable
Hydra magnipapillata NCBI; 668978988Not applicable
Nematostella vectensis * NCBI; XM_001635879 Putnam et al., 2007
Nematoda Meloidogyne hapla NCBI; BM901810 Martin et al., 2009
Pratylenchus vulnus NCBI; CV200442 Martin et al., 2009
AnnelidaCapitella sp.*JGI genome http://genome.jgi-psf.org/Capca1/Capca1.home.html
Alvinella pompejana NCBI; GO114366 www.jgi.doe.gov/sequencing/why/3135.html
Mollusca Aplysia californica NCBI; EB344940 Moroz et al., 2006
Crassostrea gigas * NCBI; FJ607013 Gueguen et al., 2003
Crassostrea virginica NCBI; CD649081Not applicable
Ilyanassa obsoleta NCBI; FK717789Not applicable
Lottia gigantea JGI genome http://genome.jgi-psf.org/Lotgi1/Lotgi1.home.html
Lymnaea stagnalis NCBI; ES576122Not applicable
Mytilus californianus NCBI; ES402065Not applicable
Mytilus galloprovincialis NCBI; FL489835 Venier et al., 2009
Echinodermata Strongylocentrotus purpuratus * NCBI; XM_001192213 Sodergren et al., 2006
Hemichordata Saccoglossus kowalevskii NCBI; 1698837910Not applicable
Chordata Branchiostoma floridae * JGI genome Putnam et al., 2008
Ciona intestinalis * TIGR genome Dehal et al., 2002
Ciona savignyi TIGR genome www.genome.wi.mit.edu/annotation/ciona/background.html
Molgula tectiformis NCBI; CJ360866 Gyoja et al., 2007
  • Sequences marked with an asterisk are complete protein coding sequences, all others are partial sequences