Table 3.

Anopheles gambiae unknown function cDNAs

Clus1R2GenBank match3E-value4Gi numb5PFAM match6E-value7Org8N9Function10F11Clone12FASTA13CLUSTAL14
721No matches foundpfam02632 BioY0.003YUnknown proteinUANCHAGN10E60-72clu.txt
1301No matches foundNo matches foundYUnknown proteinUANCHAGN10E60-130clu.txt
1401No matches foundNo matches foundYUnknown proteinUANCHAGN10E60-140clu.txt
1551No matches foundNo matches foundYUnknown proteinUANCHAGN10E60-155clu.txt
2031gi|7300136| ARP-like gene product9.00E-52gi|7300136No matches found Drosophila melanogaster YArginine rich proteinUNoORFAGN10E60-203clu.txt
1191gi|13537674| gSG8 protein [Anopheles...7.00E-58gi|13537674No matches found Anopheles gambiae NgSG8 proteinUNoORFAGN10E60-119clu.txt
1981gi|7300660| CG17271 gene product5.00E-07gi|7300660No matches found Drosophila melanogaster YSimilar to adenyl-cyclase and sex determining proteinUNoORFAGN10E60-198clu.txt
1871gi|7299765| CG9796 gene product5.00E-39gi|7299765No matches found Drosophila melanogaster YSimilar to Asn-specific plant proteaseUNoORFAGN10E60-187clu.txt
2211gi|12851155| putative [Mus musculus]5.00E-25gi|12851155pfam00361 oxidored_q18.00E-04 Mus musculus YUbiquinone complex proteinUANCHAGN10E60-221clu.txt
254No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-25clu.txtAGN10E60-25aln.txt
323No matches foundpfam02326 YMF190.005YUnknown proteinUNoORFAGN10E60-32clu.txtAGN10E60-32aln.txt
352No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-35clu.txtAGN10E60-35aln.txt
412No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-41clu.txtAGN10E60-41aln.txt
442No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-44clu.txtAGN10E60-44aln.txt
592No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-59clu.txtAGN10E60-59aln.txt
621No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-62clu.txt
631No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-63clu.txt
641No matches foundpfam02695 DUF2161.00E-07YUnknown proteinUNoORFAGN10E60-64clu.txt
661No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-66clu.txt
671No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-67clu.txt
711No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-71clu.txt
751No matches foundpfam00001 7tm_10.006YUnknown proteinUNoORFAGN10E60-75clu.txt
761No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-76clu.txt
771No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-77clu.txt
801No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60-80clu.txt
811No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-81clu.txt
821No matches foundpfam02361 CbiQ0.009YUnknown proteinUNoORFAGN10E60-82clu.txt
851No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-85clu.txt
861No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-86clu.txt
891No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-89clu.txt
911No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-91clu.txt
941No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60-94clu.txt
951No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-95clu.txt
961No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-96clu.txt
971No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-97clu.txt
981No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60-98clu.txt
1001No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-100clu.txt
1011No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-101clu.txt
1071No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-107clu.txt
1081No matches foundNo matches foundYUnknown proteinUANCHAGN10E60-108clu.txt
1101No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-110clu.txt
1131No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-113clu.txt
1141No matches foundpfam00902 UPF00320.002YUnknown proteinUNOSIGAGN10E60-114clu.txt
1151No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-115clu.txt
1171No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60-117clu.txt
1181No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-118clu.txt
1221No matches foundpfam01306 Lac Y_symp0.005YUnknown proteinUNOSIGAGN10E60-122clu.txt
1241No matches foundpfam01028 Topoisomerase_I9.00E-04YUnknown proteinUNOSIGAGN10E60-124clu.txt
1291No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60-129clu.txt
1331No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-133clu.txt
1351No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60-135clu.txt
1361No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60-136clu.txt
1371No matches foundpfam01604 7tm_50.004YUnknown proteinUNOSIGAGN10E60-137clu.txt
1381gi|6467825| Spen RNP motif p...0.004gi|6467825No matches found Drosophila melanogaster YUnknown proteinUNOSIGAGN10E60-138clu.txt
1411No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60-141clu.txt
1431No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 143clu.txt
1441No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 144clu.txt
1481gi|7290682| CG3599 gene product0.009gi|7290682No matches found Drosophila melanogaster YUnknown proteinUNOSIGAGN10E60- 148clu.txt
1491gi|7303810| CG2249 gene product8.00E-07gi|7303810No matches found Drosophila melanogaster YUnknown proteinUNOSIGAGN10E60- 149clu.txt
1501No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60- 150clu.txt
1511No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 151clu.txt
1521No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60- 152clu.txt
1531gi|6560685| unknown [Manduca...2.00E-13gi|6560685No matches found Manduca sexta YUnknown proteinUNoORFAGN10E60- 153clu.txt
1541No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60- 154clu.txt
1561No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 156clu.txt
1581No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 158clu.txt
1591No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 159clu.txt
1611No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 161clu.txt
1731No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 173clu.txt
1741gi|7303552| CG13189 gene product9.00E-21gi|7303552No matches found Drosophila melanogaster YUnknown proteinUNoORFAGN10E60- 174clu.txt
1751gi|7296046| CG17652 gene product0.008gi|7296046No matches found Drosophila melanogaster YUnknown proteinUNoORFAGN10E60- 175clu.txt
1761No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 176clu.txt
1771No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 177clu.txt
1781No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 178clu.txt
1801No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 180clu.txt
1851No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 185clu.txt
1861gi|7303876| CG12929 gene product8.00E-22gi|7303876pfam00892 DUF60.002 Drosophila melanogaster YUnknown proteinUNoORFAGN10E60- 186clu.txt
1891No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 189clu.txt
1901No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 190clu.txt
1921No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 192clu.txt
1931No matches foundNo matches foundYUnknown proteinUANCHAGN10E60- 193clu.txt
1941No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 194clu.txt
1961No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 196clu.txt
1971No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 197clu.txt
2001No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 200clu.txt
2021gi|309071| ribosomal protein S70.065gi|309071No matches found Anopheles gambiae NUnknown proteinUNoORFAGN10E60- 202clu.txt
2041No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60- 204clu.txt
2051No matches foundNo matches foundYUnknown proteinUANCHAGN10E60- 205clu.txt
2061No matches foundNo matches foundYUnknown proteinUNOSIGAGN10E60- 206clu.txt
2111No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 211clu.txt
2131No matches foundpfam01813 ATP-synt_D0.003YUnknown proteinUNoORFAGN10E60- 213clu.txt
2141No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 214clu.txt
2151No matches foundpfam00001 7tm_17.00E-04YUnknown proteinUNOSIGAGN10E60- 215clu.txt
2181No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 218clu.txt
2191No matches foundpfam01604 7tm_50.007YUnknown proteinUNoORFAGN10E60- 219clu.txt
2201No matches foundNo matches foundYUnknown proteinUANCHAGN10E60- 220clu.txt
2241No matches foundpfam01028 Topoisomerase_I0.003YUnknown proteinUNoORFAGN10E60- 224clu.txt
2271No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 227clu.txt
2311No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 231clu.txt
2331No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 233clu.txt
2341No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 234clu.txt
2371No matches foundpfam00902 UPF00322.00E-04YUnknown proteinUNOSIGAGN10E60- 237clu.txt
2381No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 238clu.txt
2411No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 241clu.txt
2421No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 242clu.txt
2451No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 245clu.txt
2461No matches foundNo matches foundYUnknown proteinUNoORFAGN10E60- 246clu.txt
2481gi|13421488| 2-oxoglutarate0.002gi|13421488No matches found Caulobacter crescentus YUnknown proteinUNoORFAGN10E60- 248clu.txt
1631gi|7303010| CG8386 gene product5.00E-56gi|7303010No matches found Drosophila melanogaster YUnknown protein — conservedUNOSIGAGN10E60- 163clu.txt
1841gi|7295175| CG8209 gene product4.00E-24gi|7295175pfam00627 UBA2.00E-08 Drosophila melanogaster YUnknown protein — conserved across speciesUNoORFAGN10E60- 184clu.txt
392No matches foundpfam01028 Topoisomerase_I2.00E-07YUnknown protein — Topoisomerase domainUNoORFAGN10E60-39clu.txtAGN10E60-39aln.txt
1681No matches foundpfam01028 Topoisomerase_I7.00E-08YUnknown protein Topoisomerase domainUNoORFAGN10E60-168clu.txt
2321gi|7295456| CG10624 gene product3.00E-83gi|7295456pfam00654 voltage_CLC4.00E-06 Drosophila melanogaster YVoltage-gated chloride channel?UNoORFAGN10E60-232clu.txt
  • 1 Clus, cluster number.

  • 2 R, number of sequences of a given custer (R, representation).

  • 3 GenBank match, best match to the GenBank database.

  • 4 E-value, indicates significance of match to NR sequence of previous column.

  • 5 Gi numb, GenBank accession number.

  • 6 PFAM match, best match to the PFAM database.

  • 7 E-value, indicates significance of match to CDD sequence of previous column.

  • 8 Org, organism where a match was found.

  • 9 N, Novel (Y, yes; N, no).

  • 10 Function, putative function or biological property.

  • 11 F, Function; U, unknown

  • 12 Clone: NOSIG, no signal peptide detected by SignalP server; No ORF, absence of a open-reading frame; ANCH, anchor protein.

  • 13 FASTA, FASTA-formatted sequences.

  • 14 CLUSTAL, clustal alignment for two or more sequences.