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Isotopic incorporation rates for shark tissues from a long-term captive feeding study
Sora Lee Kim, Carlos Martínez del Rio, Dave Casper, Paul L. Koch


Stable isotope analysis has provided insight into the dietary and habitat patterns of many birds, mammals and teleost fish. A crucial biological parameter to interpret field stable isotope data is tissue incorporation rate, which has not been well studied in large ectotherms. We report the incorporation of carbon and nitrogen into the tissues of leopard sharks (Triakis semifasciata). Because sharks have relatively slow metabolic rates and are difficult to maintain in captivity, no long-term feeding study has been conducted until the point of isotopic steady state with a diet. We kept six leopard sharks in captivity for 1250 days, measured their growth, and serially sampled plasma, red blood cells and muscle for stable carbon and nitrogen isotope analysis. A single-compartment model with first-order kinetics adequately described the incorporation patterns of carbon and nitrogen isotopes for these three tissues. Both carbon and nitrogen were incorporated faster in plasma than in muscle and red blood cells. The rate of incorporation of carbon into muscle was similar to that predicted by an allometric equation relating isotopic incorporation rate to body mass that was developed previously for teleosts. In spite of their large size and unusual physiology, the rates of isotopic incorporation in sharks seem to follow the same patterns found in other aquatic ectotherms.


Sharks are present throughout estuarine and pelagic habitats, but many species have an elusive lifestyle, which prevents accurate characterization of their diet and habitat use (Baum, 2003; Dulvy et al., 2000; Myers et al., 2007). In addition, shark species may undergo ontogenetic or seasonal shifts in diet or habitat use, and traditional biological methods (i.e. direct observation, stomach/gut content and tagging methods) often require large sample sizes and incur considerable costs to collect robust and unbiased data. A better understanding of diet and habitat use can contribute to conservation and management strategies for rapidly declining shark populations (Myers et al., 2007; Dulvy et al., 2008). One potentially useful tool is stable isotope analysis. However, the biological parameters needed to interpret field isotopic data for large ectotherms are not yet well understood.

Stable isotope analysis depends on naturally occurring variations in stable isotope ratios (i.e. 13C/12C and 15N/14N) to trace energy and nutrient flow from prey to consumers. The isotopic value of a consumer's tissues reflects baseline variations (due to seasonal shifts in primary production and/or location) and trophic level. Carbon and nitrogen isotopes are partitioned (or fractionated) during metabolic processes, such that most consumer tissues are enriched in the heavier isotope (13C and 15N) relative to prey (Martínez del Rio et al., 2009). This difference between consumer and prey is often referred to as a trophic enrichment or discrimination factor (Martínez del Rio et al., 2009). In addition, metabolically active tissues (i.e. blood and muscle) integrate the isotopic composition of resources at incorporation rates that depend on tissue type and organism characteristics (Martínez del Rio et al., 2009). Stable isotopes are often used to study the temporal variation of diet and habitat use in animals, sometimes exploiting tissues with different turnover rates (Dalerum and Angerbjörn, 2005). Among vertebrates, birds, mammals and teleost fishes have been the subjects of most research and controlled feeding experiments (Dalerum and Angerbjörn, 2005).

To estimate tissue-dependent incorporation rates, an experiment should include a switch between two isotopically distinct diets and a time series of tissue samples. Previous feeding experiments with this design estimated average carbon residence times in muscle ranging from 17 days in quail to 555 days in whitefish (Hobson and Clark, 1992; Hesslein et al., 1993). This large difference is the result of contrasting rates of protein incorporation for growth and catabolic turnover between fishes (ectotherms) and birds (endotherms) (Dalerum and Angerbjörn, 2005; Martínez del Rio et al., 2009). Martínez del Rio et al. (Martínez del Rio et al., 2009) proposed that these rates depend on the organisms' body size and metabolic activity – including protein turnover. Incorporation rates seem to be slower in larger than in smaller animals (MacAvoy et al., 2006; Reich et al., 2008; Trudel et al., 2011), and faster in endotherms than in ectotherms (Martínez del Rio et al., 2009). For example, ectothermic lizards incorporate carbon in their blood at fractional rates that are much lower than those of endotherms of the same size (Warne et al., 2010).

Better understanding the dependence of isotopic incorporation on body size will facilitate the use of stable isotope analyses on large animals because incorporation rates can be estimated from body size data (Carleton and Martínez del Rio, 2005). Weidel et al. (Weidel et al., 2011) found a clear allometric relationship between body mass and muscle incorporation rate for teleosts. However, their data include only relatively small fishes (<100 g), and it is unclear whether the relationship holds for other aquatic ectothermic vertebrates. There is only one long-term diet switching experiment (>1 year) featuring an ectotherm over 1000 g – a marine turtle (Reich et al., 2008).

To determine the carbon and nitrogen isotope incorporation rates for elasmobranch plasma, red blood cells and muscle, we conducted a 1250-day diet-switching experiment in leopard sharks (Triakis semifasciata Girard 1855). We expected incorporation rates for carbon and nitrogen to be slower for elasmobrachs than for endotherms, and incorporation rates to differ among tissues. More specifically, we expected the incorporation of both carbon and nitrogen to be more rapid in plasma than in red blood cells and muscle. Finally, our data set allowed us to examine whether Weidel et al.'s (Weidel et al., 2011) allometric relationship applies to larger elasmobranchs.


Captive feeding experiment design

Leopard sharks were chosen because they are relatively easy to maintain in captivity, locally abundant and not threatened – they are an IUCN species of Least Concern (Carlisle and Smith, 2004). Sharks were caught August 2005–January 2006 in San Francisco Bay during regular otter trawls by the Marine Science Institute (Redwood City, CA, USA). This facility also acclimated the sharks to captivity for at least 1 week; sharks were then transported to Long Marine Laboratory (LML) at the University of California, Santa Cruz (UCSC). The sharks were maintained as pairs in polyethylene tanks (2.3 m diameter, 1.2 m water depth) with a continuous flow of filtered seawater from Monterey Bay (temperature range: 13–17°C; salinity range: 30–34). All sharks were fed squid (Loligo opalescens) from their arrival at LML until 1 August 2007 (approximately 565 days). Six sharks were chosen for the experimental group and switched to a tilapia diet (Oreochromis sp., 300–500 g individuals, farm-raised in Taiwan). Three other sharks remained on the squid diet as the control group. The isotopic values of the control sharks are presented in Kim et al. (Kim et al., 2011). Headless and tail-less tilapia were cut into 20–40 g pieces and given to sharks three times a week. Sharks consumed from 3 to 5% of their body mass at each feeding. The care and sampling protocol for leopard sharks in this study was approved by the UCSC Chancellor's Animal Research Committee (CARC) and is in accordance with Institutional Animal Care and Use Committee (IACUC) standards (permit number Kochp0901).

Plasma, red blood cells and muscle were sampled approximately every 21 days from February 2006 to May 2009 following methods detailed in Kim et al. (Kim et al., 2011). Briefly, sharks were anesthetized in a smaller tank containing 30–50 mg l–1 of tricaine methanesulfonate (MS-222) dissolved in water and buffered to pH 8. Once sharks lost mobility, measurements of total length (TL; cm) and mass (kg; when possible) were recorded. Blood was taken from the caudal vein (0.7 cc), immediately centrifuged in a no-additive Vacutainer® (BD, Franklin Lakes, NJ, USA) to prevent coagulation, and plasma was transferred into another glass test tube for storage. A muscle biopsy was taken above the lateral line between the two dorsal fins and stored in a glass test tube. All samples were frozen at –20°C until preparation for stable isotope analysis.

Stable isotope analysis

Plasma and red blood cell samples were freeze-dried and homogenized before isotopic analysis, but muscle samples were lipid and urea extracted according to methods detailed in Kim and Koch (Kim and Koch, 2011). To extract urea from muscle, biopsies were freeze-dried overnight then loaded into an Accelerated Solvent Extractor cell (ASE®; Dionex, Sunnyvale, CA, USA) between glass fiber filters (GF/F, Whatman, Piscataway, NJ, USA). Each cell was treated with two rinses of petroleum ether for lipid extraction (Dobush et al., 1985) and three rinses of de-ionized water to remove urea. Each rinse was 9 ml of solution at 50°C, 10,342 kPa, and 60% volume for 5 min (Kim and Koch, 2011). After these treatments, muscle samples were dried in an oven set to 50°C or freeze-dried overnight.

Tilapia pieces fed to the sharks were randomly selected throughout the experiment and their isotopic composition was measured. Sub-samples of tilapia (N=16) were individually homogenized in a blender and freeze-dried overnight. Then, ∼10 g (dry mass) were transferred to a glass scintillation vial, decalcified with 10 ml of 0.5 mol l–1 hydrochloric acid overnight at 4°C, and lipid extracted with three rounds of petroleum ether (10 ml) via sonication for 10 min. After treatments, tilapia samples were further homogenized with a mortar and pestle before isotopic analysis.

All samples were weighed to 500±50 μg in tin capsules (3×5 mm, Costech Supplies, Valencia, CA, USA) and analyzed at the Stable Isotope Laboratory at UCSC with an elemental analyzer coupled to a Thermo-Scientific Delta+XP continuous flow, isotope-ratio-monitoring mass spectrometer (CF-IRMS; West Palm Beach, FL, USA). Isotope ratios are presented using δ notation: Embedded Image (1) where X is the element, h is the high mass number, Rsample is the high mass-to-low mass isotope ratio and Rstandard is Vienna Pee Dee Belemnite for carbon and AIR for nitrogen. Units are parts per thousand (‰). To monitor isotopic variability within and between runs, a gelatin of known carbon and nitrogen isotope composition was also measured (N=112; the standard deviations of δ13C and δ15N values were <0.1‰ and <0.2‰, respectively). The C:Natomic ratios for plasma, red blood cells and muscle were calculated and also corrected to this standard.

Data analysis

One biological parameter of interest in studies of isotope ecology is the diet-to-tissue discrimination factor, which was calculated for plasma, red blood cells and muscle as: Embedded Image (2) where δhXshark is the isotopic value of a shark tissue in steady state with the prey and δhXprey is the isotopic value of prey.

Accurate mass measurements required sharks to be out of the water and distressed for prolonged periods of time. Therefore, masses were estimated from TL measurements once a relationship between body mass and length was established. Based on mass, individual growth rates were estimated based on exponential and linear models. Traditional tissue-incorporation models assume exponential growth rates, but we also developed a model to reflect linear growth rates. To determine the best-fit model, we used Akaike's information criterion (AIC) (Anderson et al., 1998), which evaluates the model based on the number of parameters and model fit. Because most controlled feeding studies have limited observations relative to estimated parameters, the small-sample AIC (AICc) is more appropriate (Martínez del Rio and Anderson-Sprecher, 2008). The model best supported by data was chosen based on the lower AIC (or AICc) score, but relatively small differences between scores (<2) indicate similar support of data for the two models (Martínez del Rio and Anderson-Sprecher, 2008). Overall, the exponential growth model was better supported and, therefore, it is described in detail.

Tieszen et al. (Tieszen et al., 1983) proposed the following model based on exponential growth to fit stable isotope data and time after a dietary switch: Embedded Image (3) where δhXt is the isotopic value at time t, δhX is the isotopic value after steady state was reached with the new diet, δhX0 is the initial isotopic value and λ is the fractional turnover rate. Studies also express average retention time as λ–1 and evaluate λ as a sum of growth and catabolism (Hesslein et al., 1993; MacAvoy et al., 2006; Reich et al., 2008). The individual mass-based exponential growth rates were subtracted from λ to assess the contribution of catabolism to tissue turnover. Recently, Cerling et al. (Cerling et al., 2007) demonstrated the effectiveness of a multiple compartment tissue incorporation model to fit isotopic data after a dietary switching experiment. We considered a two-compartment model for carbon and nitrogen incorporation in all tissues and evaluated the best-fit model with AICc values. Model parameters were determined by a non-linear fitting routine in the program R (R Development Core Team, 2008) using packages for nonlinear least squares estimates and linear models. Statistical analyses were performed in JMP (v. 9.0, SAS Institute, Cary, NC, USA) or calculated based on methods in Kirk (Kirk, 1968).


Tilapia, the final diet, had mean (±s.d.) δ13C and δ15N values of –23.2±0.9‰ and 7.9±0.4‰, respectively. These values were significantly different from those of the initial squid diet (mean δ13C and δ15N values equaled –18.5±0.5‰ and 13.3±0.7‰, respectively; Welch's two sample t-test, δ13C, t=–19.76, d.f.=18.09, P<0.0001, δ15N, t=–39.24, d.f.=46.62, P<0.0001). Based on the δhX values from the average exponential growth model and average tilapia isotope values, discrimination factors were calculated for individual tissues (Table 1).

The relationship between mass and TL was well described by a power function (mass=0.00392±0.00258×TL3.03±0.148, r2=0.82) with an exponent not significantly different from that expected from geometric similarity (≈3, d.f.=123, t=0.20, P=0.84; Fig. 1). Exponential and linear growth models for carbon and nitrogen incorporation were supported by the data equally well (ΔAICc ranged from –1 to 3). Therefore, we chose to use the exponential growth model for isotopic incorporation as it has a more transparent interpretation. Mass-specific growth rates ranged from 0.000237 to 0.000785 day–1 (Fig. 2).

In all cases, a single compartment isotope incorporation model was better supported by the data than a two-compartment model (ΔAICc ranged from –55 to –1). Indeed, in a few cases, especially for plasma, the two-compartment model failed to converge. The one-compartment exponential model for both carbon and nitrogen described data adequately well and explained from 52 to 99% of the variation in isotopic values (Table 2). Carbon and nitrogen incorporation rates differed significantly among tissues (repeated-measures ANOVA, carbon, F1,5=11.31, P=0.0200, nitrogen, F2,10=9.22, P=0.0054; Figs 3, 4, Table 2). Average incorporation rates differed significantly between plasma, red blood cells and muscle [Tukey's honestly significantly different (HSD) test, P<0.05 for both carbon and nitrogen], but the incorporation rates of carbon and nitrogen did not differ significantly between red blood cells and muscle (Tukey's HSD, P>0.05; Table 2). As predicted, red blood cells and muscle had slower incorporation rates than plasma for both carbon and nitrogen.

Table 1.

Discrimination factors and standard deviations calculated for leopard shark plasma, red blood cells and muscle in steady state with tilapia (this study) and squid (Kim et al., 2011)

Fig. 1.

The relationship between mass and total length (TL) for the leopard sharks in this study was well described by a power function with an exponent indistinguishable from that predicted by geometric similarity.

The contribution of growth was generally higher in tissues with lower incorporation rates, such as muscle, than in those with higher incorporation rates, such as plasma and red blood cells (Table 3). However, the relationship between growth and incorporation rates was not statistically significant for carbon and nitrogen in any tissues (r2<0.44, P>0.05), except for plasma carbon (r2=0.86; ANOVA, F1,5=25.43, P=0.0073). The incorporation rates of carbon in five individuals were within the 95% prediction interval of Weidel et al.'s (Weidel et al., 2011) allometric relationship (Fig. 5).

Table 2.

Individual leopard shark incorporation rates for plasma, red blood cells and muscle based on exponential growth based on data shown in Figs 3 and 4

Fig. 2.

Growth in leopard sharks was adequately described (r2 varied from 0.93 to 0.96) by exponential models with mass-specific growth rates that ranged from 0.000237 to 0.000785 day–1. Two-letter abbreviations refer to individual sharks (see Table 2).

Fig. 3.

The incorporation of carbon into (A) plasma, (B) red blood cells and (C) muscle followed one-compartment, first-order kinetics. Individual leopard sharks are identified by different symbols, which correspond to those in Fig. 2. A model fit to mean values is given for each tissue for descriptive purposes (dashed curves). Error terms are asymptotic standard errors for estimates.


Despite their unique physiology and relatively large size for aquatic ectotherms, the sharks in this study exhibited isotopic incorporation patterns that followed those observed in other organisms (Dalerum and Angerbjörn, 2005). The rate of isotopic incorporation was faster in their plasma than in their red blood cells and muscle (Dalerum and Angerbjörn, 2005 and references therein). As observed in other ectotherms, growth contributed significantly to total isotopic incorporation and the contribution of growth to incorporation rate was higher in plasma than in muscle and red blood cells (Carleton and Martínez del Rio, 2010).

Table 3.

Percent contribution of growth to plasma, red blood cells and muscle incorporation rates in leopard shark individuals

Although many of the patterns observed in this study were similar to those reported previously, we made a few unexpected observations. We observed diet-dependent differences in tissue to diet nitrogen discrimination (Δ15Ntissues–diet). In addition, the incorporation rates of sharks were lower than those observed in other aquatic ectotherms (Hesslein et al., 1993; MacAvoy et al., 2006; Trueman et al., 2005; MacNeil et al., 2006). The contribution of growth to incorporation rates varied among tissues and individuals, and was generally lower than previously reported for aquatic ectotherms (Hesslein et al., 1993; MacAvoy et al., 2001; Trueman et al., 2005; MacNeil et al., 2006). Here we consider these unexpected results.

Fig. 4.

The incorporation of nitrogen into (A) plasma, (B) red blood cells and (C) muscle followed one-compartment, first-order kinetics. Individual leopard sharks are identified by different symbols, which correspond to those in Fig. 2. A model fit to mean values is given for each tissue for descriptive purposes (dashed curves). Error terms are asymptotic standard errors for estimates.

Differences in discrimination factors between diets

Leopard sharks had lower carbon and nitrogen discrimination factors during their initial equilibration to a squid diet than when fed on tilapia (Table 1) (Kim et al., 2011). Previous studies have suggested that carbon and nitrogen discrimination factors increase with protein content (Pearson et al., 2003) and decrease with protein quality (Florin et al., 2010). Although sharks are carnivorous, and therefore should not experience substantial variation in protein quantity in their diet, there may be nutritional differences between the proteins of a marine invertebrate (squid) and a freshwater teleost (tilapia). Florin et al. (Florin et al., 2010) varied dietary protein quality in a feeding experiment with rats and found an empirical relationship between the diets' most limiting amino acid and Δ15N values. Furthermore, the proxy of methionine amino acid content as a percentage of protein for protein quality accurately predicted Δ15N values of mammals and birds from other previously published studies [see Florin et al. (Florin et al., 2010) and references therein]. The Δ15N values for a tilapia diet are predicted to be less than for a squid diet [2.0 versus 2.9‰, respectively; protein and methionine data are from the USDA National Nutrient Database (USDA Agricultural Research Service, 2011)], which is contrary to our results. The discrepancy between the Florin et al. (Florin et al., 2010) Δ15N prediction and our study may occur because methionine requirements differ between omnivorous mammals and birds versus carnivorous sharks. In contrast to Δ15N values, the mechanism relating Δ13C values and protein has not been studied. A comparison of individual amino acid concentrations between sharks and their prey may illuminate why discrimination factors differ among diets (Martínez del Rio et al., 2009).

Fig. 5.

The carbon incorporation rates for shark muscle in this experiment (open circles) are within the 95% predicted intervals (dashed lines) of the allometric relationship (solid line) between teleost white muscle carbon incorporation rate and body size derived by Weidel et al. (Weidel et al., 2011) (closed circles).

Do leopard sharks have unusually low isotopic incorporation rates?

Tissue-specific incorporation rates were lower than previously reported on other aquatic ectotherms (e.g. Reich et al., 2008; Trudel et al., 2011), including other elasmobranchs (sharks, skates and rays) (e.g. MacNeil et al., 2006; Logan and Lutcavage, 2010). Two previous studies estimated elasmobranch tissue incorporation rates, but tissues did not reach steady state with experimental diets because of the short duration (∼60 days) of these experiments (MacNeil et al., 2006; Logan and Lutcavage, 2010). The reliability of incorporation rate estimates is crucially dependent on whether the experiments have been conducted until tissues are close to an asymptotic value (Martínez del Rio et al., 2009).

In addition to these methodological differences between our study and previous research on elasmobranchs, there are biological reasons to expect lower isotopic incorporation rates in the leopard sharks that we studied. Allometric relationships between body size and isotopic incorporation have been documented in birds (Carleton and Martínez del Rio, 2005) and mammals (Bauchinger and McWilliams, 2009). Weidel et al. (Weidel et al., 2011) found a clear allometric relationship between the rate of 13C incorporation into muscle and body mass in freshwater teleosts (Fig. 5). All previously published relationships predict lower isotopic incorporation rates in larger animals compared with smaller animals (Carleton and Martínez del Rio, 2005). Although the leopard sharks in this study were at least four times larger than the fish in the Weidel et al. (Weidel et al., 2011) data set, five out of six individuals were within the estimated 95% prediction interval of the size versus carbon isotope incorporation relationship established for muscle (Fig. 5). The success of Weidel et al.'s (Weidel et al., 2011) relationship in predicting the rate of muscle carbon incorporation of leopard sharks is reassuring. By giving a first-order estimate of the isotopic incorporation in muscle from body mass data, this allometric relationship can yield estimates that will aid future ecological studies that need to interpret field isotopic data for large ectotherms.

The contribution of growth to isotopic incorporation in leopard sharks

Many ectotherms exhibit indeterminate growth: after a rapid growth phase following birth that sometimes continues into the juvenile phase, growth slows (but does not drop to zero) as animals increase in size (Angilletta et al., 2004). Previous studies on turtles (Reich et al., 2008) and lizards (Warne et al., 2010) found slower incorporation rates in older individuals. The leopard sharks in this study had variable mass-specific growth rates (Fig. 2), and although smaller individuals generally had faster growth rates, similar-sized individuals sometimes had different growth rates (i.e. BL versus DL and ES, Fig. 2). In addition, the relationship between growth and incorporation rates was not significant, except for carbon in plasma. These observations suggest that: (1) developmental stage and growth rate should be considered before applying captive experimental results to wild subjects, and (2) there is likely individual variation in incorporation rates that are independent of growth. However, it is important to note that the contribution of growth to tissue incorporation rates was lower in this study than has been previously reported for aquatic (Hesslein et al., 1993; MacAvoy et al., 2001; Trueman et al., 2005; MacNeil et al., 2006) and terrestrial (Reich et al., 2008; Warne et al., 2010) ectotherms. Because growth contributed a relatively small portion to tissue incorporation rates, it is unlikely that elasmobranch isotopic incorporation rates are homogenized by growth (e.g. Reich et al., 2008).


We thank J. Adams, A. Bennett, M. Gorey, L. Krol, S. Perry, S. Rumbolt, A. Sjostrom, A. Thell and C. Spencer for their assistance maintaining and sampling the sharks throughout the duration of this study; the Marine Science Institute (Redwood City, CA, USA) for donating specimens from their educational program for this project; the Monterey Bay Aquarium for donating squid fed to the sharks during their initial equilibrium; H. Lee for help with the data analysis; and two anonymous reviewers for their constructive feedback.



    The infrastructure for the study was funded by the National Science Foundation (NSF-OCE 0345943) and was largely executed by N. Moore (Long Marine Laboratory, UCSC). An Institute of Geophysics and Planetary Physics Mini-Grant and a Dr Earl H. Myers and Ethel M. Myers Oceanographic and Marine Biology Trust Award provided the funding for stable isotope analysis. C.M.d.R. received support for this research from the National Science Foundation (DIOS 0848028). S.L.K. received support from the Graduate Division and Department of Earth and Planetary Sciences at the University of California, Santa Cruz.


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