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First published online April 17, 2009
Journal of Experimental Biology 212, 1277-1283 (2009)
Published by The Company of Biologists 2009
doi: 10.1242/jeb.026906
Variation in yolk precursor receptor mRNA expression is a key determinant of reproductive phenotype in the zebra finch (Taeniopygia guttata)
Department of Biological Sciences, Simon Fraser University, 8888 University Drive, Burnaby, Canada, V5A 1S6
Author for correspondence (e-mail: tdwillia{at}sfu.ca)
Accepted 10 February 2009
| Summary |
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Key words: VTG/VLDL receptor, yolk uptake, inter-individual variation, egg size, oocyte growth, zebra finch
| INTRODUCTION |
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2-macroglobulin and
riboflavin-binding protein/VTG complexes
(Mac Lachlan et al., 1994
The regulation and dynamics of VTG/VLDL receptors in relation to
vitellogenesis and follicle development have been characterized in
Drosophila (Schonbaum et al.,
2000
), trout (Nunez Rodriguez
et al., 1996
; Perazzolo et
al., 1999
), white perch
(Hirayama et al., 2003
) and
chicken (Shen et al., 1993
).
These studies have shown that the VTG/VLDL-R is a key component of yolk
precursor uptake by developing follicles and may play a role in the regulation
of oocyte growth (Hiramatsu et al.,
2004
; Shen et al.,
1993
). These previous studies, however, have not investigated
whether variation in VTG/VLDL-R expression plays a role in inter-individual
variation in reproductive phenotype (e.g. follicle or egg size). Egg size
varies greatly among individuals within avian populations, with the
largest-laid eggs being up to 100% larger than the smallest egg, and with high
repeatability of egg size (Christians,
2002
). Yet, the physiological, cellular or molecular mechanisms
underlying such marked inter-individual variation in reproductive phenotype
remain poorly understood (Christians,
2002
; Williams,
2005
). Christians and Williams
(Christians and Williams,
2001
) showed that inter-individual variation in the size of
vitellogenic follicles in zebra finches [Taeniopygia guttata; a model
songbird (Zann, 1996
)] was
correlated with the rate of incorporation of radio-labelled amino acid into
yolk. This strongly suggests that receptor-mediated yolk uptake, and hence the
expression level or the functional activity of the VTG/VLDL-R, might be a key
determinant of phenotypic variation in follicle, yolk or egg size, or other
components of reproductive phenotype.
In this paper, we describe variation in VTG/VLDL-R mRNA expression in relation to yolk uptake, follicle development and phenotypic variation in female reproductive investment (follicle/egg mass, clutch size) in female zebra finches. Our specific objectives were (a) to identify the sequence of the zebra finch VTG/VLDL-R gene and compare this with the chicken sequence; (b) to characterize tissue-specific expression of VTG/VLDL-R mRNA, (c) to investigate changes in VTG/VLDL-R mRNA expression during different stages of ovarian follicle maturation (ovary, and smallest pre-F3 follicle to largest vitellogenic F1 follicle) and (d) to correlate inter-individual variation in VTG/VLDL-R mRNA expression to inter-individual variation in reproductive phenotype (follicle and egg mass, clutch size and laying interval).
| MATERIALS AND METHODS |
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VTG/VLDL receptor sequence assembly
Sequences representing each of the 18 exons of the chicken VTG/VLDL
receptor (gene ID 396154) were blasted against the Taeniopygia
guttata–WGS database
(http://www.ncbi.nlm.nih.gov/genome/guide/finch/),
using the discontiguous megablast algorithm. To complete the intron sequences
and assemble the entire gene, sequence strings upstream and downstream of the
exons were used in subsequent searches. The sequence information was used in
primer design.
mRNA extraction and reverse transcription
Total mRNA was extracted from tissue samples using a PickPen and QuickPickM
SML mRNA kit (BioNobile, Turku, Finland) following the manufacturer's
recommended protocols. Briefly, the tissue sample (up to 15 mg) was
homogenized manually using a plastic pestle in an RNase-free Eppendorf tube
with 400 µl lysis/binding buffer for about 2 min. For vitellogenic
follicles, the yolk was removed (the follicle membrane can be peeled off when
the yolk is in a frozen state) and discarded before homogenizing. Samples were
centrifuged for 2 min at 14,000 r.p.m. (9860 g) and the
supernatant was transferred to another tube with a 21G needle attached to a 1
ml syringe (for homogenization of viscous cell lysates). Oligo
(dT30)-coated paramagnetic beads (30µl) were added and the
samples were incubated with the beads for 5 min. The beads were removed and
suspended in 15 µl RNase/DNase-free water at room temperature with gentle
mixing. The beads were washed twice with 400 µl wash buffer A and once with
400 µl wash buffer B. After incubation at 70°C for 5 min, the beads
were removed from the mRNA solution, which was kept on ice and used
immediately for reverse transcription.
Extracted mRNA was reverse transcribed to cDNA with the QuantiTect Reverse Transcription kit (Qiagen) following the manufacturer's recommended protocols. For every sample, 12 µl extracted mRNA solution and 2µl of genomic DNA Wipeout Buffer (Qiagen) were incubated for 2 min at 42°C to remove genomic DNA contamination. Quantiscript RT Buffer (4 µl), RT Primer Mix (1 µl) and Quantiscript Reverse Transcriptase (1 µl) were added to the samples, which were held for 25 min at 42°C and 3 min at 95°C. The cDNA solutions were stored at–20°C for future use.
PCR identification of splice variants
For identification of the splice variants of VTG/VLDL-R mRNA in different
tissues, the following primers upstream and downstream of exon 16 were
designed: P5 (forward primer), 5'-ACC CTA GTA AAC AAC CTC AAT GAT
G-3'; P6 (reverse primer), 5'-AGG AAG AAT GAT CCA AGC TGC TGA
T-3'. The cDNA synthesized from breeding zebra finch ovary, muscle and
liver was used for PCR identification, using the QuantiFast SYBR green PCR kit
(Qiagen) on a MiniOpticon real-time PCR system (BioRad, Mississauga, ON,
Canada). The thermal cycling protocol was as follows: (a) step 1: initial
template denaturation/enzyme activation at 95°C for 5 min; (b) step 2:
denaturation at 95°C for 10 s; (3) step 3: annealing/extension at 60°C
for 30 s; (4) repeat step 2 and step 3 for 29 more cycles; (5) melting curve
test from 65°C to 95°C, in 0.5°C steps. The PCR products were
subjected to agarose gel (1%) electrophoresis and stained with ethidium
bromide. A DNA ladder (GeneRuler 100 bp DNA ladder plus, Fermentas,
Burlington, ON, Canada) was used to indicate the product size.
Real-time quantitative PCR
SYBR green-based real-time PCR was used to quantify the transcript
abundance of zebra finch VTG/VLDL-R and β-actin (internal control) in the
ovary (including white, pre-vitellogenic follicles), vitellogenic follicles
(normally 3–4 for each bird), post-ovulatory follicles, liver and
pectoral muscle of breeding females, and the ovary of non-breeding females.
Primers for real-time PCR were designed using the online software IDT SciTools
PrimerQuest and were purchased from Integrated DNA Technologies (IDT,
Coralville, IA, USA). The primer sequences were as follow: P1 (forward primer
for actin), 5'-TGC CGC GCT CGT TGT TGA CAA TGG TT-3'; P2 (reverse
primer for actin), 5'-TCT GAC CCA TAC CGA CCA TCA CAC CCT GA-3';
P3 (forward primer for VTG/VLDL-R), 5'-TTG TGT GCC TCA GTG GTC AAT GTG
TGC CTA-3'; P4 (reverse primer for VTG/VLDL-R), 5'-ACT GAG TTG ACT
GAG GAC CGC AGC TGA TTT-3'. All primers were used at a concentration of
83 nmol l–1. PCR amplifications and fluorescence detection
were carried out with the MiniOpticon real-time PCR system (BioRad, iQTM
SYBR Green Supermix reaction volume 25µl). The thermal cycling protocol was
as follows: (a) step 1: initial template denaturation/enzyme activation at
98°C for 30 s; (b) step 2: denaturation at 92°C for 1 s; (3) step 3:
annealing/extension at 70°C for 20 s; (4) repeat step 2 and step 3 for 39
more cycles; (5) melting curve test from 65°C to 95°C, in 0.5°C
steps. Primer efficiency was calculated by duplicate standard curves, which
were generated using a serial dilution of follicle cDNA samples
(R2>0.99). With this protocol the amplification
efficiency for the primer pairs was 86% for β-actin and 95% for
VTG/VLDL-R.
In order to assess inter-assay variation for each PCR run, an aliquot of a
mixture of several different follicle cDNA samples was used as control.
Normalization of the relative expression levels of VTG/VLDL-R (relative to the
reference gene, β-actin) to variation in fold induction of the control
sample was achieved using the equation given by Pfaffl
(Pfaffl, 2001
). All the
measurements in the real-time PCR assay were run in duplicate and some samples
were run in triplicate. All analyses were conducted using SAS (SAS Institute
2002–2003 version 9. 1; SAS Institute, Cary, NC, USA). We analysed
variation in expression with tissue type or follicle stage using mixed models
(proc MIXED) with `bird' as a random effect to control for the fact that
multiple tissues were sampled from the same individual. Tukey–Kramer
adjustment was used to determine significance for multiple
post-hoc paired contrasts. Values are presented as means
± s.e.m. unless otherwise stated.
| RESULTS |
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Validation of real-time PCR
Specificity of real-time PCR quantification was confirmed with (1) melting
curve tests, (2) gel electrophoresis of PCR product and (3) sequencing. Each
primer set designed for amplification of zebra finch β-actin and
VTG/VLDL-R produced one PCR product corresponding to the expected lengths of
134 bp and 150 bp (Fig. 1),
respectively. The consistent melting temperature and the sequencing results
confirmed primer specificity. Inter-assay variability (coefficient of
variation), calculated using the control sample, was 1.80% for β-actin
and 1.62% for VTG/VLDL-R (N=23).
Tissue distribution of VTG/VLDL-R mRNA expression
VTG/VLDL-R mRNA expression varied significantly with tissue type
(F5,35.7=9.20, P<0.001;
Fig. 2A). High levels of
expression of VTG/VLDL-R mRNA were observed in the ovary of breeding and
non-breeding females, vitellogenic follicles, post-ovulatory follicles and
muscle (Fig. 2A). Lower levels
of VTG/VLDL-R mRNA expression were also found in liver. VTG/VLDL-R mRNA
expression level in ovary tissue of breeding females was significantly higher
than in F1 follicles, liver (Tukey–Kramer adjusted P<0.001
in both cases) and post-ovulatory follicles (P<0.05; no other
differences were significant). Different tissues showed expression of
different splice variants of the VTG/VLDL-R mRNA. As shown in
Fig. 3, in zebra finch, the
VTG/VLDL-R mRNA is the LR8–form in oocytes and liver but LR8+ in muscle.
The lanes for ovary and liver showed a lower band (about 300 bp) while the
muscle lane showed a higher band (about 400 bp). For each tissue tested, only
one splice variant, either LR8–or LR8+, was detected.
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VTG/VLDL-R mRNA expression varied highly significantly during oocyte growth
in breeding female zebra finches (F4,48.1=12.55,
P<0.001; Fig. 2B).
VTG/VLDL-R mRNA expression was highest in the ovary (which potentially
included multiple white, pre-vitellogenic follicles, see below), and decreased
during follicle development such that mRNA levels were significantly lower in
F1 follicles (Tukey–Kramer adjusted P<0.001). F1 follicles
also had lower VTG/VLDL-R mRNA expression than pre-F3 follicles
(P=0.05). There was a
5-fold difference in average mRNA levels
comparing the ovary and the largest vitellogenic F1 follicle
(Fig. 2B).
Inter-individual variation of VTG/VLDL-R mRNA expression
VTG/VLDL-R mRNA levels in the ovary were highly variable (c.v.=69.4%)
potentially because ovaries contained multiple pre-vitellogenic follicles
(which we did not dissect out). To explore this large variation we compared
ovary mRNA levels with estimated clutch size and laying interval (time from
pairing to laying the first egg) of individual birds. We estimated the clutch
size of each female based on the dissection results (e.g. if a bird had four
developing vitellogenic follicles, plus one oviductal egg and one laid egg,
her clutch size would be
6 eggs). We designated each female as either (a)
a large clutch size female with estimated clutch size
6 eggs
(N=7), or (b) a small clutch size female with estimated clutch size
<6 eggs (N=8). Mean VTG/VLDL-R mRNA expression level in the ovary
was significantly higher in large clutch size females (2.029±0.342)
compared with small clutch size females (0.749±0.148;
t13=3.60, P<0.005) but mRNA expression levels
of F3 follicles were independent of estimated clutch size (P>0.1).
Furthermore, there was a significant positive correlation between the
VTG/VLDL-R mRNA expression in ovary and laying interval (R=0.55,
P=0.05, N=13; two females were excluded from this analysis
because they had laying intervals of 3 days compared with a minimum of 4 days
to produce an egg and these two birds must have started egg formation before
pairing).
We analysed the correlation between inter-individual variation in egg mass and the variation in VTG/VLDL-R mRNA expression for different stages of vitellogenic follicle development. Variation in F3 follicle mRNA expression was significantly positively correlated with egg mass (R=0.64, P=0.04, N=11; Fig. 5A) and with F1 follicle mass (R=0.64, P=0.03, N=11; Fig. 5B). No other correlations were significant for other follicle stages with either egg mass or F1 follicle mass (P>0.1 in all cases).
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| DISCUSSION |
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4000 bp upstream of exon 2, and a start codon 122 bp
downstream of the predicted transcription start site. As expected for this
highly conserved gene, the gene organization and coding sequence are very
similar to the homologous genes from other birds, fish and mammals.
We found that VTG/VLDL-R mRNA is abundantly expressed in ovary tissue but
also present in low, but clearly detectable amounts in liver (
6% of ovary
level). While VTG/VLDL-R mRNA could not be found in chicken liver
(Bujo et al., 1995a
), our
findings are in line with various reports from mammalian
(Bujo et al., 1995a
) and fish
species, where the receptor has been reported in low amounts in liver
(Tiebel et al., 1999
). We also
found high levels of VTG/VLDL-R mRNA in skeletal muscle of zebra finch, up to
50% of the amount present in a breeding female's ovary. Muscle, however,
contains a different splice variant from ovary (LR8+, containing all exons, as
opposed to LR8–, which lacks exon 16). Tissue-specific expression of
these splice variants has also been reported for chicken and other taxa
(Bujo et al., 1995b
). In
chicken, LR8+ is dominant in skeletal muscle and heart, while LR8– is
dominant in the ovary (Bujo et al.,
1995b
) as well as being expressed in germ cells of testes
(Lindstedt et al., 1997
).
Little is known about functional differences between the two receptor forms,
but given that the VTG/VLDL-R can interact with various ligands, it is
conceivable that the LR8+ and LR8–forms have different ligand
preferences (Bujo et al.,
1995b
).
Overall, the temporal transcriptional pattern of VTG/VLDL-R mRNA during
oocyte growth in zebra finches shows a clear decreasing pattern: ovary tissue,
representing the pre-vitellogenic stage, has the highest mRNA expression and
expression decreases as follicle development progresses, with lowest levels of
VTG/VLDL-R expression seen in the F1 follicle just prior to ovulation. This
temporal pattern, reported here for the first time for an avian species, is
very similar to that found in fish
(Hiramatsu et al., 2004
;
Perazzolo et al., 1999
), even
though follicle development proceeds differently in birds and fish
(hierarchical and synchronous, respectively), highlighting the high degree of
conservation of receptor function during oocyte development in oviparous
vertebrates. In the domestic hen, receptors of pre-vitellogenic follicles are
located centrally not cortically which may explain why there is no yolk
precursor uptake (Shen et al.,
1993
). Shen and colleagues
(Shen et al., 1993
) proposed
that at the onset of rapid yolk development this pre-existing pool of
receptors is redistributed to the periphery of the oocyte, with negligible
de novo synthesis of receptors during the final stage of oocyte
growth (see also Hiramatsu et al.,
2004
). They further suggested that this pattern of receptor
expression was due to the fact that the nuclear and biosynthetic machinery
necessary for transcriptional, translational and post-translational events
would be compromised by mechanical distortion during later stages of rapid
oocyte growth when the space not occupied by yolk is less than 0.1% of the
oocyte's volume in a layer 2 µm thick
(Shen et al., 1993
). Our data
provide strong support for this hypothesis that yolk protein receptors are
synthesized at early stages of oocyte development, when levels of VTG/VLDL-R
mRNA expression are high, but that there is negligible de novo
synthesis of receptors during the final stage of oocyte growth, with low mRNA
expression in F1 follicles.
We found large inter-individual variation in ovary VTG/VLDL-R mRNA
expression (greater than that for vitellogenic follicles) which was correlated
with individual variation in clutch size: larger clutch individuals had higher
ovary mRNA expression. This suggests that VTG/VLDL-R mRNA might be
functionally related, either directly or indirectly, to clutch size.
Presumably higher mRNA levels could support yolk uptake of a greater number of
follicles, while lower levels might support only a few follicles. Thus,
differences in VTG/VLDL-R mRNA levels in the ovary might be a key component of
the mechanism causing variation of clutch size. We also found a positive
relationship between ovary VTG/VLDL-R mRNA expression and laying interval. It
is likely that this is independent of the relationship with clutch size
because clutch size and laying interval are negatively correlated in zebra
finches and other birds. Generally, individuals with longer laying intervals
lay smaller clutches (Williams,
1996
) and one would expect lower mRNA levels in these birds.
However, it is possible that oestrogen-induced up-regulation of VTG/VLDL-R
mRNA expression is initiated in most females shortly after pairing, and
females that delay laying may simply accumulate higher levels of mRNA in the
pre-vitellogenic follicles of the ovary before follicle development is
initiated.
While factors such as age, diet quality and mate quality can affect egg
size, these are not sufficient to explain the almost two-fold variation in egg
size among individual females (Christians,
2002
; Williams,
1998
), nor do they provide an obvious mechanistic explanation.
Recent studies have shown that this marked inter-individual variation in egg
size is largely independent of variation in other physiological traits which
might be expected to influence egg size: body composition
(Vezina and Williams, 2003
),
circulating plasma levels of the two main yolk precursors, VTG and VLDL, as
well as the plasma levels of oestradiol, the main hormone that regulates many
aspects of egg formation (Williams et al.,
2004
). However, simple measurements of circulating yolk precursor
levels cannot reveal potential differences in the rate of yolk precursor
synthesis and uptake, which have as yet not been directly measured. Yolk
precursor uptake should depend on the concentration of VTG/VLDL-R on the
oocyte plasma membrane, and thus on its mRNA expression level. In this
context, we compared the inter-individual variation in follicle VTG/VLDL mRNA
expression and variation in egg and F1 follicle mass and found clear positive
correlations, confirming our hypothesis that individual variation in the level
of VTG/VLDL-R is an important factor contributing to variation in reproductive
phenotype. We suggest that the expression of the VTG/VLDL-R in the F3 follicle
is functionally significant since the F3 follicle stage is at the start of the
most rapid and linear phase of oocyte growth (see
Fig. 4). Follicle mass
continues to increase rapidly through the period from F2 to F1, although
VTG/VLDL-R mRNA levels are decreased (see
Fig. 2B). Thus, it appears that
most of the receptor protein needed has already been synthesized, and
continues to direct the uptake of VTG/VLDL into the oocyte
(Shen et al., 1993
). Following
the uptake of lipoprotein–receptor complexes by receptor-mediated
endocytosis, the receptors are generally recycled and transported back to the
cell membrane, and thus little additional gene transcription is required.
In conclusion, our study suggests that VTG/VLDL-R mRNA expression is a key
determinant of inter-individual variation in reproductive phenotype, and this
provides an important first step in identifying mechanistic links between gene
regulation and reproductive effort in oviparous species. Clearly, however,
many questions remain unresolved. Firstly, as is the case in most studies that
correlate gene expression with physiological variation in phenotype
(Crawford and Oleksiak, 2007
;
Whitehead and Crawford, 2006
),
our study focused on the variation in mRNA levels. Changes in mRNA, however,
do not necessarily correlate with changes in protein activity and function
(Nikinmaa and Waser, 2007
),
and thus it will be necessary to analyse variation in the mature VTG/VLDL-R
protein as well. The pattern of oocyte growth, coupled with our data on mRNA
expression, would predict that VTG/VLDL-R protein will increase during
follicle growth. Secondly, another receptor, the LRP380 receptor, also binds
VTG and might function with the VLDL-R (LR8) in regulating oocyte growth,
although the molecular and functional characteristics of this receptor are
still poorly known even in the well-studied domestic hen
(Schneider, 2007
). Maintenance
of vitellogenic follicles in the restricted-ovulator (R/O) chicken mutant,
which lacks functional VTG/VLDL-R, does imply an alternative system for oocyte
uptake (Elkin et al., 2003
).
However, it is not clear whether this reflects normal LRP380 function typical
of `wild-type' birds, as R/O hens are hyperlipidaemic with 4- to 5-fold
elevated plasma levels of VLDLy and VTG
(Bujo et al., 1995a
;
Elkin et al., 2003
), i.e. the
presence of LRP380 receptors does not fully compensate for the lack of
VTG/VLDL receptors. Finally, and more generally, it is becoming clear that
both yolk precursor receptors bind and transport non-lipoproteins to the yolk
(e.g. Mac Lachlan et al.,
1994
; Mahon et al.,
1999
). Variation in yolk precursor receptor expression, as we have
documented here, might therefore provide an important mechanism mediating
inter-individual variation in `maternal effects', i.e. non-genetic
contributions that mother's provide offspring via yolk uptake.
| Footnotes |
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