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First published online May 1, 2009
Journal of Experimental Biology 212, 1559-1567 (2009)
Published by The Company of Biologists 2009
doi: 10.1242/jeb.027383
Cloning and functional expression of the first eukaryotic Na+–tryptophan symporter, AgNAT6
1 Department of Physiology and Biophysics, Rosalind Franklin University of
Medicine and Science, 3333 Green Bay Road, North Chicago, IL 60064, USA
2 Whitney Laboratory for Marine Bioscience, University of Florida, St Augustine,
FL 32080, USA
3 A. N. Belozersky Institute, Moscow State University, Moscow, 119899,
Russia
* Author for correspondence (e-mail: dmitri.boudko{at}rosalindfranklin.edu)
Accepted 10 March 2009
| Summary |
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Key words: NAT, AgNAT8, synergy
| INTRODUCTION |
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20
members per genome in mammals and insects compared with 0–4 members per
genome in prokaryotes) with segregation into two large subfamilies:
neurotransmitter transporters (NTTs) and nutrient amino acid transporters
(NATs) (Boudko et al., 2005b
Previously, we characterized the first of the seven NAT-SLC6 members in the
Anopheles gambiae genome, AgNAT8
(Meleshkevitch et al., 2006
).
It mediates Na+ (or K+)-coupled symport of
L-phenylalanine, L-tyrosine and
3,4-dihydroxy-L-phenylalanine (L-DOPA). In the absence
of these substrates, AgNAT8 can absorb L-tryptophan and
5-hydroxytryptophan (5-HTP); however, it cannot acquire the indole-branched
substrates in the presence of physiological concentrations of phenyl-branched
substrates. Now, we have cloned and characterized AgNAT6, a phylogenetically
close relative of AgNAT8. It absorbs tryptophan and, with less efficiency,
other aromatic substrates. The identified indole- and phenol-branch-specific
AgNATs have surprisingly little variation in their substrate-binding pockets,
exhibiting only three amino acid differences that are likely to be responsible
for their unique selectivity profiles. The AgNAT6 expression pattern
correlates with tissues that are involved in nutrient absorption and neuronal
functions.
| MATERIALS AND METHODS |
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40 ng of AgNAT6 cRNA and
incubated for 2–6 days at 17°C in sterile N98-oocyte medium
(Boudko et al., 2005a
Bioinformatics
AgNAT6 sequence fragments were assembled using SeqManII (DNASTAR, Madison,
WI, USA). Homologous sequences were derived from non-redundant protein
databases (NCBI). The phylogenetic analysis included 63 SLC6 members from
selected dipteran genomes plus a few reference sequences of cloned NAT-SLC6
members. The protein alignments were generated using ClustalX
(Thompson et al., 1997
) and
visualized using GeneDoc software (Nicholas et al., 1977). A phylogenetic tree
was constructed using Mega 4 software
(Tamura et al., 2007
).
Fine-tuning of the alignment was performed manually by considering sequence
and 3D structure alignments of selected NATs with LeuT (PDB ID 2a65)
(Yamashita et al., 2005
).
Homology modeling was performed by satisfaction of spatial restraints
(Sali and Blundell, 1993
)
using Modeler (Marti-Renom et al.,
2000
).
Quantitative real-time polymerase chain reaction assay (qPCR)
RNA isolation, cDNA synthesis and qPCR analysis were performed as described
previously (Meleshkevitch et al.,
2006
). Primers were designed with the following sequences:
5'-GGC AAC ACC AGT CGA ACC A-3' and 5'-GCT GCA CCT TGT GGA
TGT TCT-3'. Expression of AgNAT6 in each tissue was normalized to that
found in whole larvae, which was set to a value of one. Data represent three
averaged replicates of three independent experiments. Excel software
(Microsoft Inc., Redmond, WA, USA) was used to collect and analyze data and
SigmaPlot 10 (Systat Software, Inc., San Jose, CA, USA) was used to generate
final graphs.
Isotope uptake assay
Uptake assays were performed 4 days after RNA injection on oocytes using a
previously described protocol
(Meleshkevitch et al., 2006
).
Briefly, distilled water (DW)- and AgNAT6 RNA-injected oocytes were exposed in
a 100 mmol l–1 NaCl solution supplemented with 10 µCi
ml–1 L-[5-3H]tryptophan or
L-[2,3,4,5,6-3H]phenylalanine (specific activity 25 and
125 µCi mmol l–1, respectively, Amersham Biosciences,
Piscataway, NJ, USA), brought to a final concentration of 1 mmol
l–1 with unlabeled tryptophan or phenylalanine. Uptake was
terminated after 10 min by washing oocytes with a cold 100 mmol
l–1 choline chloride solution. Pairs of oocytes were placed
in scintillation vials with 200 µl of 10% SDS; 4 ml of scintillation fluid
was added, and the radioactivity was counted using a Beckman-Coulter LS 6500
scintillation counter (Beckman-Coulter, Inc., Fullerton, CA, USA). The
quantity and ratio of substrate uptake were calculated as described earlier
(Meleshkevitch et al., 2006
).
The measured ratio values were normalized vs the value for
radiolabeled L-tryptophan uptake in AgNAT6 transcript-injected
oocytes.
Whole-mount in situ hybridization
Anopheles gambiae larvae (G3 strain) were hatched from eggs
supplied by MR4 (The Malaria Research and Reference Reagents Resource Center,
Atlanta, GA, USA) and raised as described earlier
(Okech et al., 2008b
). A
purified pGEM-T AgNAT6 plasmid was linearized with NcoI or
NotI restriction enzymes to obtain full-length, run-off transcripts
using SP6 and T7 promoters for anti-sense and sense probes, respectively.
DIG-labeled probes were transcribed in vitro using a DIG RNA labeling
kit (Roche Diagnostics, Mannheim, Germany). Fourth instar An. gambiae
larvae were immobilized in ice-cold phosphate-buffered saline (PBS, Fisher
Scientific, Itasca, IL, USA) opened by a lateral incision, and fixed in 4%
paraformaldehyde/PBS overnight. Preparations were dehydrated/rehydrated by
passing through a PBS/methanol gradient set (100%
PBS–3:1–1:1–1:3–100% methanol, then in reverse order),
10 min for each mixture, pre-treated with proteinase K/detergent solution
(0.1% Tween-20 in PBS supplemented with 10 µgml–1
proteinase K) for 30–40 min. The preparation was pre-hybridized for
6–8 h at 50°C in hybridization solution (50% formamide, 5 mmol
l–1 EDTA, 5x SSC, 1x Denhardt's solution, 0.1%
Tween-20, 0.5 mg ml–1 yeast tRNA), then hybridized by
incubation with approximately 1 µg of DIG-labeled RNA probe per ml of
hybridization solution at 50°C overnight. The hybridized preparations were
labeled with alkaline phosphatase-conjugated, anti-DIG antibodies according to
the manufacturer's protocol. Hybridization patterns were visualized in a
NBT/BCIP alkaline buffer solution (Boehringer Mannheim, Inc., GmbH, Mannheim,
Germany). Labeled preparations were embedded in 3:1 glycerol:PBS on glass
slides and photographed using an Olympus SZX 12 stereo microscope (Olympus
America, Center Valley, PA, USA) and Pixera CCD camera (Pixera Corp., Los
Gatos, CA, USA).
Data analysis
Values depicted in graphs represent the mean ± s.d. from at least
three different experiments using at least three different oocytes. The
electrical current amplitudes were normalized relative to a maximum current in
each data set. Kinetic profiles and constants were derived by fitting
normalized data sets with a three-parameter sigmoidal Hill function
y=axb/(cb+xb);
where: a=ymax, the derived maximum current;
b=
, the order of the transport process;
c=x50%; (x,
y)=K0.5,[S], the substrate concentration
at 50% of the transport velocity.
| RESULTS |
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AgNAT6 has a typical SLC6 structure with 12 transmembrane domains and
intracellular C and N termini (Fig.
1). Twelve coordinating organic substrate residues are
identifiable based on the sequence-structure alignment of AgNAT6, AeAAT1
(Boudko et al., 2005a
), AgNAT8
(Meleshkevitch et al., 2006
)
and TnaT (Androutsellis-Theotokis et al.,
2003
) with crystallized LeuTAa
(Yamashita et al., 2005
)
(Fig. 1;
Table 1). The
substrate-interacting moieties comprise a surprisingly conserved pattern, with
nine absolutely conserved sites between AgNAT6 and AgNAT8
(Table 1). Three different
amino acids in transmembrane domains 1, 6 and 8 could be responsible for the
tryptophan selectivity of AgNAT6. Specifically they include: L91, because this
site is different from a corresponding M95 site in AgNAT8; T333,
which is different from AgNAT8 S339 and identical to TnaT T234, and G437 which
is unique to AgNAT6 (d, i and u indicate corresponding sites in
Table 1). These three positions
correspond to N21, S356 and A358 of LeuTAa. All three substitutions
aid in the reduction of the side-chain volume and corresponding increases in
the substrate-binding envelope volume, which correlates with a capacity to
accept larger sized indole- vs phenol-branched substrates
(Fig. 3A, inset).
|
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The expression of all seven AgNATs, nine AeNATs and six DmNATs was
confirmed by molecular cloning from specific cDNA collections (all 22 clone
sequences are available in the NCBI database, see
Fig. 1 for NCBI accession
numbers), but presently only two AgNATs have been characterized by
heterologous expression; previously, AgNAT8
(Meleshkevitch et al., 2006
)
and, now, AgNAT6. The application of aromatic amino acids produced a barely
detectable current in naive and DW-injected X. laevis oocytes (<5
nA at 1 mmol l–1 concentration of aromatic substrate in ND98
at –50 mV holding transmembrane potential, Hp; data not shown). AgNAT6
expression increased a background leak current from 7±5 nA to
82±24 nA, N>100 at –30 mV Hp) and mediated large
aromatic amino acid-induced currents of 20–150 nA
(Fig. 3A). In contrast to
phenylalanine-preferring AgNAT8, AgNAT6 responded with notably larger currents
upon tryptophan and 5-HTP application (Fig.
3B), suggesting a higher transport velocity for indole- than
phenol-branched substrates. Among Phe-derived metabolites only Trp (addition
of a hydroxyl group to the end of the 6-carbon aromatic ring with
corresponding increase in molecular volume) produced currents that were
similar to the indole-branch substrate-induced currents
(Fig. 3A). Replacing
Na+ with Li+ or K+ abolished
tryptophan-induced currents at –30 mV Hp
(Fig. 3D). However, the
extended current–voltage (I–V) graph revealed that AgNAT6
can generate large substrate-coupled K+ currents at transmembrane
voltages more negative than –40 mV
(Fig. 3E). Isotope-uptake
experiments confirmed AgNAT6-coupled organic substrate uptake with notably
higher uptake ratios for isotope-labeled tryptophan than for phenylalanine
(Fig. 3F).
The AgNAT6 mechanism has saturable kinetics
(Fig. 4A). Tryptophan has a
remarkably higher apparent affinity than all other tested substrates
(K50Trp=1.3 µmol l–1
compared with
K0.55-HTP=270<K0.5Tyr<K0.5Phe<K0.5DOPA<K0.5Leu=890
µmol l–1). The orders of the organic substrate
translocation reaction (Hill constant
) determined at 98 mmol
l–1 Na+ concentrations were all similar and
approached 1 (Fig. 4B).
|
In situ hybridization of the larval alimentary canal with an AgNAT6 antisense probe revealed a relatively high accumulation of AgNAT6 transcript in the heart, gastric caeca and posterior midgut (Fig. 5A). Weaker but detectable labeling was present in the anterior midgut (Fig. 5A). Strong in situ hybridization signals were detected in the neuronal plexus of the larval head associated with chemo-, visual- and mechano-sensory modalities and in the neuropile of the ventral nerve cord (Fig. 5B,C). A strong signal was detected in a few individual neurons upon low resolution imaging of whole-mount preparations (images not shown). A very strong signal was also detected in the 2nd and 3rd instar larval alimentary canal, especially when young larvae were exposed to limited nutrient conditions (Fig. 5D). qPCR confirmed a ubiquitous expression of AgNAT6 with very strong tissue-specific and developmental stage-specific variations of AgNAT6 transcript quantities (Fig. 5E).
|
| DISCUSSION |
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AgNAT6 is a new member of the NAT-SLC6 subfamily
(Fig. 1). All currently
characterized NATs encode transporters with similar electrochemical mechanisms
utilizing the most ubiquitous monovalent cation (primarily Na+)
electrochemical gradient to symport (co-transport) neutral amino acids. The
NATs population includes broad substrate spectrum, neutral amino acid
transporters, which were identified in mammals
(Broer et al., 2004
) and
insects [see figure 1s,
B0AT1 and DmNAT1, in Miller et al.
(Miller et al., 2008
)]. In
insects the NAT subfamily has an additional expansion, which is absent in
mammals. This expansion includes seven genes in An. gambiae
(Fig. 2). One of these genes,
AgNAT8, was recently characterized as a Na+-dependent,
voltage-driven (Harvey et al.,
2009
) mechanism that is adapted to transport phenylalanine and its
related metabolites (Meleshkevitch et al.,
2006
). The present characterization of its closest phylogenetic
relative, AgNAT6, reveals a different mechanism, specializing in the active
absorption of tryptophan and its related metabolites. AgNAT6 and AgNAT8 are
expressed in similar loci and may act in synergy to optimize the absorption of
indole- or phenyl-branched substrates, respectively
(Okech et al., 2008b
). The
aromatic AgNATs result from earlier gene fission in the NAT population of
An. gambiae that may correspond with adaptations of mosquito larvae
for development in habitats with a low level of essential nutrients. The
identified properties of AgNAT6 fit with our previous hypothesis that NATs
undergo rapid gene duplication which drives the specialization of individual
transporters and adaptive plasticity of integrated NAT functions
(Boudko et al., 2005a
).
AgNAT6, like all other characterized NATs, is a rectifying, normally
irreversible, transporter (Fig.
3E). Both aromatic AgNATs use Na+ electromotive forces;
however, they could utilize K+ electromotive forces with
appropriate inward directions (Fig.
3E). In this respect they represent a transitional phenotype
between Na+-specific and K+-preferring NATs such as
mammalian B0ATs (Broer et al.,
2004
; Broer et al.,
2006
) and caterpillar KAAT1
(Castagna et al., 1998
),
reflecting adaptations of these organisms to high-sodium ion (in mammals) and
trace-sodium ion/high-potassium ion (in caterpillars) environments.
Correspondingly, the capacity of AgNATs to use Na+ and
K+ can be explained as an adaptation to varied concentrations of
these cations. For example, mosquito larvae are able to deal with low
concentrations of both alkali metal cations in their freshwater habitat. A
cation pool that is depleted by NATs activity in the absorptive region of the
posterior midgut may be internally recycled in mosquito larvae via
the earlier proposed anterior midgut alkalinization pathways
(Harvey et al., 2009
;
Okech et al., 2008a
). However,
considering the limited efficiency of a cation-recycling framework, the
balance of the Na+/K+ flux would be dependent upon the
environmental availability of these ions. The availability of Na+
and K+ also varies over the life history of adult mosquitoes. The
use of Na+ is expected to be very low in adults feeding on plant
fluids; but it may increase dramatically after a blood meal.
Both aromatic NATs are sensitive to extracellular Cl–
activity. When it is present outside Cl– increases the net
current that is carried via these transporters
(Fig. 3D,E). This observation
suggests that Cl– may act as a NAT modulator rather than an
electrophoretic carrier because adding negative charges to an inward
cation:neutral amino acid symport will reduce rather than increase the net
inward current (e.g. Fig. 3D;
by convention in neurophysiology and insect epithelial transport physiology a
positive ion moving into a cell or a negative ion moving out is said to carry
an inward current). The data present another interesting possibility –
that AgNAT6 function is facilitated by bidirectional (electroneutral)
Cl– transport. During outward movement Cl–
may energize changes in transporter conformation. A similar mechanism was
described in SLC1 transporters that use K+ to reset conformations
(reviewed by Kanai and Hediger,
2004
). The structural basis of Cl– interaction
with SLC6 members was the subject of a recent analysis suggesting a possible
replacement of Cl– by another negatively charged ion in
chloride-independent members of SLC6
(Forrest et al., 2007
;
Zomot et al., 2007
). However,
the exact role of this anion in SLC6 function remains to be clarified.
AgNAT6–Cl– interaction will require a more detailed
analysis that would be well beyond the scope of an initial characterization of
AgNAT6.
Despite its obvious similarity with AgNAT8, the electrochemical properties
of AgNAT6 have some unique traits. A most notable difference is in organic
substrate specificity with AgNAT6's strong and narrow preference to
indole-branched substrates (Fig.
3A, Fig. 4A,B).
Collected data suggest that AgNAT6 is specialized to transport tryptophan with
minimal interference from phenylalanine and other neutral amino acids, the
cumulative concentration of which is about two orders of magnitude greater
than that of tryptophan in the larval and adult nutrient digests [inferred
from the frequency of amino acids in protein sequences
(Brooks et al., 2002
)].
Comparison of AgNAT6 and AgNAT8
(Meleshkevitch et al., 2006
)
in situ hybridization (Fig.
5) and immunolabeling (Okech
et al., 2008b
) profiles revealed broadly similar localizations,
but with notable differences in the details. Specifically, AgNAT6 occupies a
broader area of the larval gut (Fig.
5) with significant differences in the polar distribution in the
gastric caeca and anterior midgut area relative to AgNAT8
(Okech et al., 2008b
).
Aromatic AgNATs also possess different expression patterns in the central
nervous system and sensory afferents (Fig.
5B,C) (Meleshkevitch et al.,
2006
). These differences in expression may both reduce
morphological overlap of aromatic NATs activities and support specific
functions with elevated requirements for aromatic substrates. In the midgut
the differing distributions may reduce competition of aromatic AgNATs for the
energy of transmembrane electrochemical gradients whereas in the CNS they may
support cell-specific metabolic processes, e.g. synthesis of indoleamine and
catecholamine neurotransmitters.
AgNAT6 generates a large Na+ leak current that was not observed
upon heterologous expression of AgNAT8
(Meleshkevitch et al., 2006
)
or any other mosquito NAT such as AeAAT1 from Aedes aegypti
(Boudko et al., 2005a
). In this
respect AgNAT6 is similar to CAATCH1 from the caterpillar
(Quick and Stevens, 2001
),
which may act as a cationic leak channel with some inhibition by weakly
transported substrates (i.e. Fig.
3C for L-Phe and L-DOPA). However, that kind
of response was observed only 6–8 days after injection of AgNAT6 RNA
into oocytes. It equally may be an artifact of heterologous over-expression
rather than a physiologically significant mechanism. Additional experiments
will be necessary to validate this phenomenon and to understand its
physiological implications.
The pH dependency profile of AgNAT6 is different from that of AgNAT8,
perhaps reflecting adaptations to the changing pH profile along the alimentary
canal of mosquito larvae (Clements,
1992
; Ramsay,
1950
). The transport stoichiometry of AgNAT6 changes reversibly
between 1 and 2 Na+ per amino acid transported. The physiological
benefit of such an adaptation is obvious: 1:1 operation will conserve
Na+ pool-coupled electrochemical energy, whereas 1:2 operation
permits organic substrate translocation against a 2 times higher chemical
gradient. The recent crystallographic structure of the bacterial NAT-SLC6
member LeuTAa suggests that a single sodium ion is sufficient for
substrate coordination in the substrate-binding pocket of the transporter
(Yamashita et al., 2005
). The
paralogous mammalian B0ATs operate with 1:1 substrate stoichiometry
(Broer, 2008
), whereas other
members of the NTT-SLC6 subfamily may use 3, 2 or 1 Na+ for 1
neurotransmitter molecule (Chen et al.,
2004
). For example, GlyT2a and GlyT1b expressed in neuronal and
glial cells respectively conduct 3 Na+:Cl–:Gly and
2 Na+:Cl–:Gly symport
(Roux and Supplisson, 2000
).
So, switching of a `stoichiometry gear' – often referred to as a `slip'
– is common in the history of SLC6 family members, even among recently
diverged transporters. It is also likely that the slip in AgNAT6 stoichiometry
may depend upon physiological conditions via a yet to be elucidated
mechanism. Incidentally, the `low' tested concentration of the substrate is
still 230-fold greater than that of the K50Trp,
suggesting an organic substrate binding, kinetically uncoupled mechanism.
Considering the possibility of a concentration-dependent shift of the
dose–response curve, a more direct and precise technique of
stoichiometry assays will be necessary to clarify this phenomenon.
The presently characterized aromatic amino acid-specific NATs include one
bacterial (Androutsellis-Theotokis et al.,
2003
) and two mosquito transporters
(Meleshkevitch et al., 2006
;
Okech et al., 2008b
) (and data
presented here). The usage of aromatic amino acids varies dramatically in
different organisms, developmental stages, tissues and individual cells. Their
availability also varies with ecological and nutrient conditions. For example,
freshwater mosquito larvae filter-feeding on micro-organisms and organic
debris, and mammals digesting protein-rich food may have a different
concentration profile of essential amino acids in the alimentary canal and
systemic circulations. Mosquito larvae require high quantities of aromatic
amino acids for cuticle formation and tanning during successive ecdyses as
well as protein accumulation between ecdysial events. A high-throughput
transport of aromatic amino acids from the digestive system to the ovaries is
critical during egg development and chorion formation. AgNAT6 is perfectly
suited to acquire the most under-represented essential amino acids from the
larval environment as well as to normalize the supply of such amino acids
during specific metabolic processes such as oogenesis or neurotransmitter
synthesis.
In summary, we have characterized the first eukaryotic Na+:tryptophan symporter, AgNAT6, which also represents the second characterized narrow substrate spectra transporter (the first being AgNAT8) cloned from a biomedically important model organism, the African malaria mosquito, An. gambiae. AgNAT6 plays a key role in the uphill delivery of essential tryptophan and, in synergy with phenyl-branched substrate-specific AgNAT8, mediates comprehensive absorption and systemic redistribution of aromatic substrates. These narrow selectivity NATs may have evolved under pressure of high demand vs low availability for aromatic amino acids. A likely reason for the additional expansion of NATs in invertebrates with narrow substrate spectra is the amplification of the transport network for the acquisition and redistribution of environmentally scarce substrates. It is reasonable to propose that metazoan organisms competing for an identical set of essential amino acids evolved distinct strategies and mechanisms for their absorption and redistribution. Future analysis of NAT populations is necessary for a better understanding of the structural, integrative and evolutionary aspects of SLC6 functions. The fact that NATs are lineage-specific and unique providers of essential for development substrates identifies them as targets for environmentally safe control of pests and pathogen-transmitting invertebrate organisms.
| Footnotes |
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