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First published online June 13, 2008
Journal of Experimental Biology 211, 2172-2184 (2008)
Published by The Company of Biologists 2008
doi: 10.1242/jeb.016592
Expression of myogenic regulatory factors in the muscle-derived electric organ of Sternopygus macrurus

1 Department of Biology, New Mexico State University, Las Cruces, NM 88003,
USA
2 Department of Agronomy and Horticulture, New Mexico State University, Las
Cruces, NM 88003, USA
Author for correspondence (e-mail:
gunguez{at}nmsu.edu)
Accepted 11 March 2008
| Summary |
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Key words: electric organ, myogenic regulatory factor, electrical activity, skeletal muscle, electric fish
| INTRODUCTION |
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Skeletal muscle gene expression is controlled by a complex group of
regulators that derive from one of two major families of transcription
factors. The MyoD family of myogenic regulatory factors (MRFs) consists of
MyoD, myogenin, myf5 and MRF4 (Emerson,
1990
; Weintraub,
1993
). MRFs encode structurally related, sequence-specific
transcription factors that bind to E-box consensus promoter elements (CANNTG)
(Emerson, 1990
;
Fujisawa-Sehara et al., 1992
;
Weintraub, 1993
) and are
essential for the transcriptional activation of many muscle-specific genes
during differentiation of skeletal muscle
(Buckingham, 1994
;
Olson, 1990
). Once
differentiation is complete, MRFs continue to be expressed, although at very
low levels (Buonanno et al.,
1992
; Eftimie et al.,
1991
; Weis et al.,
2000
; Wright et al.,
1989
). The MRF expression patterns can be up-regulated in adult
muscles following changes in electrical activation patterns or complete
removal of motoneuron synaptic input
(Buonanno et al., 1992
;
Eftimie et al., 1991
;
Voytik et al., 1993
;
Weis et al., 2000
). Such
alterations in neural input lead to changes in MRF expression levels that
often precede changes in the transcription of known target muscle genes
(Buonanno and Fields, 1999
;
Voytik et al., 1993
;
Witzemann and Sakmann, 1991
).
Hence, these studies have implicated MRFs as key mediators in the regulation
of muscle-specific proteins by neural input
(Emerson, 1990
). Furthermore,
MRFs are known to be under the control of both positive and negative
regulatory factors. Among these factors, Id proteins act as negative
regulators, whereas MEF2 proteins are reported to enhance MRF induction of
muscle-specific genes (for a review, see
Puri and Sartorelli, 2000
).
The isolation of clearly defined subsets of muscle-specific proteins, however,
would greatly facilitate the study of the mechanism(s) by which the network of
regulation of MRFs might mediate the neural regulation of the skeletal muscle
program.
To study the roles that MRFs play in regulating select protein components
of the muscle program, we used a novel but simple system – the
phenotypic plasticity between muscle and the muscle-derived electric organ
(EO) in the electric fish Sternopygus macrurus. In S.
macrurus, some skeletal muscle fibers fully differentiate only to undergo
an extreme phenotypic conversion into the non-contractile, electrogenic cells
of the EO. The mature electrocytes share many, but not all, cellular features
with muscle fibers by maintaining the expression of only a partial myogenic
program. For example, mature electrocytes are multinucleated similar to their
muscle precursors, but do not have sarcomeres or T-tubules
(Patterson and Zakon, 1996
;
Unguez and Zakon, 1998a
).
Electrocytes also express desmin, actin, sarcomeric
-actinin, and
acetylcholine receptors, but they do not contain myosin, tropomyosin or
troponin-T (Cuellar et al.,
2006
; Patterson and Zakon,
1996
; Unguez and Zakon,
1998a
). Similar to skeletal muscle fibers, the mature phenotype of
electrocytes is influenced by neural input
(Unguez and Zakon, 1998b
).
Electrocytes are innervated by electromotoneurons (EMNs), which exert a
continuous activation pattern that ranges from 50 to 200 Hz depending on sex
(Mills et al., 1992
). Removal
of this activation by spinal cord transection (ST) results in the formation of
sarcomeres de novo and detection of sarcomeric proteins such as
myosin and tropomyosin (Unguez and Zakon,
1998b
). Hence, manipulation of the EO phenotype provides an
excellent model to study the neural regulation of clearly defined subsets of
muscle proteins.
In this study, we examined whether enhancement of the muscle program in electrocytes by electrical inactivation is due to an expression pattern of MRFs or their co-regulators that correlates with the level and number of muscle proteins that are up-regulated after ST. We show that both muscle and EO transcribe all four MRFs and that the EO contains higher levels of myogenin, myf5 and MRF4 transcripts than skeletal muscle. Further, ST resulted in the up-regulation of some muscle proteins in electrocytes without an accompanying increase in MRF transcript levels. In addition, our expression studies did not reveal expression patterns of MEF2C and Id transcripts that were tissue specific or inactivity dependent. These data contribute to our understanding of the expression of MRFs and the plasticity of the vertebrate skeletal muscle program that brings about the muscle-like phenotype of the non-contractile electrogenic cells in S. macrurus.
| MATERIALS AND METHODS |
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Spinal cord transection surgery
Adult fish were anesthetized with 2-phenoxyethanol (750
µll–1). An incision (
3 cm) was made on the dorsal
side at the level of the pectoral fin. A partial laminectomy was performed to
expose the spinal cord. The spinal cord was cut with a scalpel and complete
transection was verified visually under a stereoscope. In one sham experiment,
a partial laminectomy was performed, but the spinal cord was left intact.
Wounds were sutured and treated with a topical antibiotic (nystatin and
triamcinolone acetonide ointment USP, E. Fougeranco and Co., Melville, NY,
USA). Fish were monitored until fully recovered from anesthesia in their
tanks. Stress Coat® (Aquarium Pharmaceuticals, Inc., Chalfont, PA, USA)
was added to the tanks as an additional anti-infection agent.
To test for functional electrical inactivation of the EO by ST, the EO
discharge (EOD) was assessed three times a week. Only those fish that did not
have detectable EOD from the day of ST to the end of the 5 week survival
period were used for further analyses. The 5 week survival period was chosen
based on previous reports that some sarcomeric proteins are re-expressed in
clusters within the cytoplasm of most electrocytes
(Unguez and Zakon, 1998b
).
Five weeks after ST, fish were re-anesthetized and the distal 5–6 cm
segment of the tail was amputated (
25% of total fish length). The most
proximal centimeter of the excised tail segment was frozen on cork with Tissue
Freezing MediumTM (TBS, Durham, NC, USA) in isopentane chilled in liquid
nitrogen and used for immunohistochemical analyses. The remaining tail segment
was dissected to separate muscle from EO and each tissue was immediately
submerged in RNAlater and stored at –80°C. The EOD
continued to be monitored after tail amputation to determine the time at which
it reappeared and, hence, indicate regeneration of spinal axons to innervate
electrocytes.
RNA isolation
Total cellular RNA was isolated from adult skeletal muscle, 5 week ST
muscle and liver using a protocol described previously
(Kim et al., 2004
). To remove
residual DNA, total RNA isolated from each tissue used for RT-PCR experiments
was treated with either DNase I, amplification grade (Invitrogen, Carlsbad,
CA, USA; RT-PCR) or TURBO DNA-freeTM (Ambion; real-time RT-PCR)
and analyzed by spectrophotometry (OD260/OD280). On
average, total RNA isolations yielded 1–3% of starting material from
each of the different tissues.
Cloning and isolation of S. macrurus myf5 and MRF4
Heterologous degenerate oligonucleotide primers were designed for
myf5 and MRF4 based on the respective GenBank vertebrate
sequences using CODEHOP (Rose et al.,
1998
). Alignments used to generate myf5 primers
corresponding to the CSDEDEHVRA (sense primer) and the QVENNYYSLPG (antisense
primer) domains included protein sequences from zebrafish (accession number
NP_571651.1), puffer fish (accession number CAC39208.1), mouse (accession
number NP_032682.1), human (accession number NP_005584.1), striped bass
(accession number AF463525_1), carp (accession number BAA33566.1), chicken
(accession number S41126), red-spotted newt (accession number Q91154),
Xenopus tropicalis (accession number AAL11024.1), Xenopus
laevis (accession number P24700) and cow (accession number P17667).
MRF4 primers corresponding to the SSGDEHVLA (sense primer) and the
HWKKTCNTW (antisense primer) domains were designed using alignments from
protein sequences of zebrafish (accession number AAQ67704), and two different
sequences from puffer fish (accession numbers AAR20812 and CAC39207).
To clone partial myf5 and MRF4 cDNAs from S. macrurus, we carried out reverse transcription (RT) and PCR separately. The RT reaction from 250–300 ng total RNA was performed using the SuperScriptTM first-strand synthesis system for RT-PCR (Invitrogen) following the manufacturer's specifications. PCR amplification of the newly generated cDNAs (0.5–1 µg of cDNA) was carried out using a touchdown PCR module to increase amplification specificity with either Platinum® Taq DNA polymerase (MRF4; Invitrogen) or AdvantageTM 2 PCR enzyme system (myf5; BD Biosciences, Palo Alto, CA, USA). Following an initial 2 min denaturation at 94°C, the touchdown PCR profile included eight cycles of 30 s denaturation at 94°C, 30 s primer annealing at 64–68°C (depending on the primers) and 60 s elongation at 72°C. Further PCR amplification was performed in the same reaction tube immediately following the touchdown PCR step, and this profile consisted of 20–28 cycles of 30 s denaturation at 94°C, 30 s primer annealing at 63–64°C (depending on the primers) and 60 s elongation at 72°C, and finishing with a final elongation step at 72°C for 7 min. RT and PCR conditions (primer concentrations, input RNA, cycling conditions) were initially optimized and these were identical for all samples.
RT-PCR products for myf5 and MRF4 were PCR purified using the QIAquick® PCR purification kit (Qiagen, Valencia, CA, USA), subcloned into the pGEM®-T Easy vector (Promega, Madison, WI, USA), and transformed into JM109 high efficiency competent cells (Promega). Plasmids from 10–20 cDNA clones of each transcript were isolated using the QIAprep® spin miniprep kit (Qiagen), sequenced in both directions using an Applied Biosystems (Foster City, CA, USA) automated DNA sequencer (Model 3100) and analyzed using the Vector NTI suite 8.0 software (InforMax, Inc., Bethesda, MD, USA).
Upon verification of the cloned sequences obtained from the EO, homologous
primers for each transcript specific to S. macrurus were generated
from the on-line Primer3 software program
(http://frodo.wi.mit.edu/cgi-bin/primer3/primer3_www.cgi).
Qualitative RT-PCR experiments were performed on skeletal muscle, EO, liver
and brain following similar RT and PCR parameters to those described above.
RT-PCR experiments using S. macrurus-specific myf5 (YGLPAES,
sense; SSIVDRL, antisense) and MRF4 (HCEGQC, sense; CSAKDHS,
antisense) primers resulted in partial sequences of 209 bp and 301 bp,
respectively. The cloned partial sequences from myf5 and
MRF4 were used for 3'- and 5'-rapid amplification of cDNA
ends (RACE) experiments (see below). Qualitative RT-PCR experiments also
included MyoD and myogenin using homologous primers
corresponding to the cysteine-rich (WACKACK; sense primer) and serine-rich
(SSPRSNC; antisense primer) domains of S. macrurus MyoD, and the
MNPNQRL (the region between the first and second helix domains; sense primer)
and MRSLTSIV (antisense primer) domain of S. macrurus myogenin
(Kim et al., 2004
). PCR
products were run out on a 1–2.5% agarose gel stained with ethidium
bromide (10 µl/100 ml). To monitor DNA contamination in all experiments,
control reactions were performed without the cDNA template or reverse
transcriptase enzyme. To ensure consistency in reaction loading and execution,
qualitative RT-PCR experiments using S. macrurus-specific
glyceraldehyde 3-phosphate dehydrogenase (GAPDH) primers were carried out
(Kim et al., 2004
).
The full-length coding sequences of both myf5 and MRF4
were obtained by RACE prepared from total RNA (300 ng to 1 µg) of EO from
S. macrurus using a protocol adapted from Chen and Soriano for
amplification of the 3' end of myf5
(Chen and Soriano, 2003
) and
the SMARTTM RACE cDNA amplification kit (BD Biosciences, San Jose, CA,
USA) for amplifying the 5' end of myf5, and the 3' and
5' ends of MRF4. RACE first-strand synthesis was performed
using oligo-ligated mRNA for 3' and 5' amplifications.
myf5-specific primers for 3'-RACE included
5'-CCCGACAGCCTCCACCAG-3' and
5'-CCAGTGAGCAGAGTGACGAGGACTCGAGCTGAAGCTTTTTTTTTTTTTTTTT-3', and
for 5'-RACE were 5'-GCTCTCCGCAGGCAGGCCATAGTA-3' and
5'-CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT-3'.
MRF4-specific primers for 3'-RACE were
5'-GGACTTGTTGCACACCCTGGACGAG-3' and
5'-CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT-3', and for
5'-RACE were 5'-TTGAGTCGTCTTCTCTCCCGCAGAGTG-3' and
5'-CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT-3'. Purified
products from myf5 and MRF4 RACE experiments were subcloned
into the pCR® 2.1-TOPO® vector (Invitrogen), transformed into One
Shot® MACH1TM T1 phage-resistant chemically competent E.
coli cells (Invitrogen), isolated with the QIAprep spin miniprep kit, and
sequenced in both directions using either a Li-Cor-4200L Global IR2 DNA
(Lincoln, NE, USA) or an Applied Biosystems automated DNA sequencer (Model
3100).
Nucleotide and deduced amino acid sequences were analyzed using the Vector NTI Suite 8.0 (InforMax, Inc.). Searches were performed using the Basic Local Alignment Search Tool (BLAST) network service from the National Center for Biotechnology Information (NCBI; http://www.ncbi.nlm.nih.gov). Multiple sequence alignments were generated with ClustalW from the European Bioinformatics Institute (http://www.ebi.ac.uk/clustalw). The two novel sequences described here have been submitted to the DNA databases with accession numbers DQ016032 and DQ059552 for S. macrurus myf5 and MRF4, respectively.
Cloning and isolation of S. macrurus Id and MEF2 genes
Heterologous degenerate oligonucleotide primers for Id1, Id2 and
Id4 were also generated using CODEHOP
(Rose et al., 1998
).
Id1 primers were designed based on alignments from human (accession
number AAH00613.1), rat (accession number NP_036929.1), mouse (accession
number AAH25073.1) and trout (accession number CAA69656.1), and correspond to
the QQMNVFLYDMN (sense primer) and the IDYIWDLQL (antisense primer) domains.
Id2 primer alignments included trout (accession number CAA69657.1),
zebrafish (accession number AAH56303.1), rat (accession number NP_037192.1),
human (accession number NP_002157.2), mouse (accession number AAH06921.1) and
Xenopus laevis (accession number AAH41527.1), and correspond to the
SKTPVDDP (sense primer) and the DYILDLQI (antisense primer) domains.
Id4 primers were designed using alignments from mouse (accession
number NP_112443.1), human (accession number AAH14941.1), Xenopus
laevis (accession number AAP34250.1), horse (accession number
NP_989613.1) and rat (accession number NP_783172.1), and correspond to the
ALCLQCDMN (sense primer) and the DYILDLQL (antisense primer) domains.
Partial Id1, Id2 and Id4 cDNAs from S. macrurus were cloned using an RT-PCR approach similar to that used to clone myf5 and MRF4 (see above). Upon verification of the cloned sequences obtained from adult skeletal muscle, homologous primers for Id1 and Id2, but not Id4, specific to S. macrurus were generated using Primer3. Homologous primers for MEF2C were also generated using Primer3 based on a cDNA sequence isolated from an S. macrurus EO cDNA library. RT-PCR experiments using S. macrurus-specific Id1 (VPTLPPNK, sense; AAASDADE, antisense) and Id2 (LYNMNDLYS, sense; KMEILQHV, antisense) primers amplified partial sequences of 304 bp and 101 bp, respectively. Id4 was detected only in brain tissue of S. macrurus using heterologous degenerate primers. RT-PCR experiments with S. macrurus-specific MEF2C primers (SWLLVS, sense; PSAIST, antisense) amplified a partial sequence of 265 bp.
Quantification of myogenic regulatory factors in skeletal muscle and EO
Primer and probe design
Primers and probes used for TaqMan real-time quantitative RT-PCR of MRFs
were designed based on the S. macrurus-specific sequences of
MyoD (accession number AY396566), myogenin (accession number
AY396565) and MRF4 (accession number DQ059552) using Primer Express
software (version 1.5, Applied Biosystems;
Table 1). Primers and probes
for myf5 were designed using Primer3
(Table 1). Probes for each MRF
were designed with the fluorescent reporter dye FAM (6-carboxy-fluorescein)
attached to the 5' end and a quencher dye TAMRA
(6-carboxy-tetramethyl-rhodamine) attached to the 3' end.
|
Synthesis of standards and generation of standard curves
For each MRF, an RNA standard was generated by subcloning each amplicon
behind a T7 or Sp6 RNA polymerase promoter in a plasmid vector (pGEM-T Easy,
Promega). cDNAs specific to MyoD, myogenin, myf5 and MRF4
were generated using the One-Step RT-PCR superscript with Platinum
Taq system (Invitrogen) according to the manufacturer's
specifications. Reverse transcription from 1 µg of total RNA extracted from
skeletal muscle of S. macrurus was reverse transcribed for 30 min at
50°C, followed by a 2 min incubation at 94°C. PCR amplification of the
cDNAs corresponding to MyoD, myogenin, myf5 and MRF4 mRNAs
was performed in the same reaction tube immediately following the RT step. The
PCR profile included 30–40 cycles of 15 s denaturation at 94°C, 30 s
primer annealing at 58°C, 30 s elongation at 72°C, and a final
extension for 7 min at 72°C. PCR products were purified, subcloned into
the pGEMT-Easy vector, transformed into JM109 frozen competent cells
(Promega), and sequenced for verification as described above prior to in
vitro transcription. MRF cDNAs were transcribed in vitro using
the SP6/T7 transcription kit (Roche, Pleasanton, CA, USA) and their copy
number was calculated {formula: [X g µl–1
RNA/(transcript length in nucleotides x 340)] x
6.022x1023=Y molecules µl–1} to
generate standard curves using 5–6 dilutions of known RNA amounts.
TaqMan probe RT-PCR
Real-time quantitative RT-PCR experiments were carried out in triplicate in
96-well optical plates on total RNA from skeletal muscle (N=5) and EO
(N=5) using the one-step QuantiTect probe RT-PCR kit (Qiagen) and
performed in a MJ research DNA engine Opticon2 system (Bio-Rad Laboratories,
Richmond, CA, USA). Each reaction (25 µl) included tissue RNA
(1–2µl at 300 ngµl–1) or RNA standard, 2x
QuantiTect probe RT-PCR master mix (12.5 µl), sense and antisense primers
(1.25 µl at 0.5 µmol l–1, each), TaqMan probe (1.25
µl at 0.1 µmol l–1), QuantiTect probe RT mix (0.25
µl) and RNase-free water (variable). PCR parameters were 48°C for 60
min, 95°C for 10 min, 45 cycles of 95°C for 15 s and 60°C for 1
min. To monitor DNA contamination in all experiments, control reactions
without the RNA template were performed in triplicate and one reaction without
the reverse transcriptase enzyme was carried out per tissue sample.
Data analysis
The number of PCR cycles needed to generate a fluorescence signal greater
than a predefined threshold is defined as the threshold cycle value, or
Ct. The Ct value for each RT-PCR
reaction was extrapolated using the respective standard curve to determine the
number of copies (molecules µl–1) of MyoD, myogenin,
myf5 and MRF4 mRNA molecules in skeletal muscle and EO tissue.
To confirm product size, the RT-PCR products were also run on a 1.5% agarose
gel stained with ethidium bromide (10 µl/100 ml).
Statistical analysis
All data are presented as means ± s.e.m. Group differences were
determined using a split-plot in a completely randomized design with treatment
(control vs ST) as the whole-plot factor, tissue type (muscle
vs EO) as the split-plot factor, and fish as the experimental unit.
All statistical analyses were performed using SAS software (SAS Institute
Inc., Cary, NC, USA) with the
-level set at P
0.05.
Southern blot analysis
Liver and brain tissues used for genomic DNA isolation were dissected and
immediately immersed in liquid nitrogen. Genomic DNA was isolated from these
tissues using a protocol adapted from the DNA isolation method of Sambrook et
al. (Sambrook et al., 1989
).
To remove residual RNA, total DNA isolated from each tissue was treated with
RNAse A (0.1 µg µl–1; Qiagen) and analyzed by
electrophoresis and spectrophotometry (OD260/OD280).
Genomic DNA (40 µg) was singly digested with BamHI, EcoRI
and HindIII, and double digested with BamHI/EcoRI,
BamHI/HindIII, and EcoRI/HindIII for 6 h
at 37°C. Restriction enzyme digests of S. macrurus genomic DNA
(10 µg per digest) were size fractionated on 1% agarose gels in 1x
TAE buffer and blots were generated using standard methods as described by
Sambrook et al. (Sambrook et al.,
1989
) for alkaline transfer onto nylon membranes.
Radiolabeled probes were synthesized by 32P-oligolabeling of
MyoD (640bp, nucleotides 7–646, accession number AY396566),
myogenin (805 bp, nucleotides 588–1395, accession number
AY396565), myf5 (718bp, nucleotides 441–1156, accession number
DQ016032) and MRF4 (636bp, nucleotides 433–1092, DQ059552)
specific to S. macrurus. Probes against myogenin, myf5 and
MRF4 spanned the 3' untranslated regions (UTRs) of the genes.
Unincorporated radioactivity was removed with a Sephadex G-50 spin column.
Following alkaline transfer, nylon membranes were neutralized in
0.5moll–1 Na2HPO4 (pH 7.2). Probes were
boiled and added to the pre-hybridization solution (1% BSA,
1mmoll–1 EDTA, 0.5moll–1
Na2HPO4, 7% SDS) in the bag with the membrane. Blots
were hybridized in hybridization buffer overnight and then washed in several
changes of 1mmoll–1 EDTA, 40mmoll–1
Na2HPO4, 1% SDS. The first wash also contained 3% fish
gelatin and 5% SDS. The hybridizations and washes were carried out at 65°C
(high stringency,
85% complementarity for probe hybridization).
Immunolabeling
Serial cryosections (18 µm) mounted on glass slides and air dried at
room temperature were rehydrated in 0.1 mol l–1
phosphate-buffered saline (PBS, pH 7.4), incubated in blocking solution [PBS
and 2% bovine serum albumin (BSA)] for 30 min, and subsequently incubated
overnight (12–15 h) in primary antibody diluted in blocking solution at
room temperature. Monoclonal antibodies against all sarcomeric myosin heavy
chains (MHCs; MF20, 1:100 dilution), fast MHC (A4.74; 1:50), slow MHC (N2.261;
1:100), tropomyosin (CH1; 1:50 dilution) and neurofilament-associated protein
(3A10; 1:100 dilution) were purchased from the Developmental Studies Hybridoma
Bank (Iowa City, IA, USA). Monoclonal antibodies against developmental MHC
(DEV; 1:50) and troponin-T (1:100) were purchased from Novacastra Laboratories
(Vector Laboratories, Burlingame, CA, USA) and Sigma (St Louis, MO, USA),
respectively. Filamentous actin was visualized using
rhodamine–phalloidin (Molecular Probes, Eugene, OR, USA).
Fluorescein-conjugated secondary antibodies (AlexaFluor 488 or 565; Molecular
Probes; 1:200) were used to detect the antibody–antigen complex. Images
of immunolabeled tissue sections were visualized and captured using a BioRad
1024 confocal microscope (Bio-Rad Laboratories).
| RESULTS |
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Effects of electrical inactivity on MRF expression patterns
We previously demonstrated that removal of neural influences by ST leads to
an up-regulation of MHC and tropomyosin in some mature electrocytes 2 weeks
after ST (Unguez and Zakon,
1998b
), whereas by 5 weeks post-ST surgery, all electrocytes
contained different amounts of these proteins. Whether the re-expression of
select sarcomeric genes was accompanied by specific changes in MRF profiles
was not determined. In this study we found that the MRF expression pattern in
the EO 5 weeks after ST was
MRF4>MyoD>myf5>myogenin
(Fig. 4). In contrast to
control tissues, the mean transcript level of all four MRFs in skeletal muscle
and EO was reduced after ST (Fig.
4). However, only the reduction in MyoD mRNA level in
muscle and EO after ST was significant. In fact, MyoD mRNA level in
muscle and EO was about 10- and 4-fold lower, respectively, than the control
values (Fig. 4).
Expression of MRF co-regulators in S. macrurus tissues
The expression of all four MRF transcripts in electrocytes at levels higher
than in skeletal muscle was unexpected given that electrocytes do not retain
the full muscle program. Since the activities of MRFs are known to be under
the control of both positive and negative regulatory factors including MEF2
and Id transcription factors, respectively
(Benezra et al., 1990
;
Molkentin et al., 1995
), we
also determined the expression patterns of some of these co-regulators.
Specifically, we isolated partial cDNA sequences of Id1 (304 bp),
Id2 (101 bp) and MEF2C (265 bp) from S. macrurus
muscle, EO, liver, brain and heart (Fig.
5). Qualitative RT-PCR showed that Id1 is transcribed in
all tissues analyzed although the band detected in muscle had a lower
intensity than that detected in EO, liver or brain
(Fig. 5). Id2
transcript was also detected in all tissues analyzed with band intensities
more or less similar to those observed for Id1
(Fig. 5). A partial 141 bp cDNA
sequence of Id4 was isolated from S. macrurus brain, but was
not detected in muscle, EO or liver (data not shown). The absence of
Id4 in muscle and EO together with the difficulty in cloning
Id3 may suggest that Id1 and Id2 are the
predominant members of the Id family expressed in tissues of the myogenic
lineage in S. macrurus. A MEF2C cDNA fragment corresponding
to the C-terminal transactivating domain II in mouse was isolated from S.
macrurus muscle. Muscle, EO, liver, brain and heart showed detectable
levels of MEF2C transcript. Interestingly, MEF2C in EO
appeared to be present at higher levels than in muscle or non-skeletal muscle
tissues based on band intensity (Fig.
5). The expression of both Id1 and Id2
transcripts after the 5 week ST period showed a pattern similar to that in
control muscle and EO, i.e. skeletal muscle in ST fish showed detectable
levels of Id1 at a somewhat higher intensity than those found in EO,
and Id2 mRNA content in muscle and EO appeared similar before and
after ST (Fig. 6). The
differential expression of MEF2C mRNA in muscle and EO in control
fish was also similar to that found in ST fish
(Fig. 6).
|
|
Single copy genes encoding myogenic MRF factors in S. macrurus
Southern blots were used to estimate the number of copies of MyoD,
myogenin, myf5 and MRF4 genes in S. macrurus. The
distribution of restriction fragments of each MRF was detected following
hybridization of genomic DNA digested with BamHI, EcoRI, and
HindIII, and double digests with BamHI/EcoRI,
BamHI/HindIII, and EcoRI/HindIII
(Fig. 7). The Southern blots
were probed with 32P-labeled MyoD (640 bp),
myogenin (805 bp), myf5 (718 bp) and MRF4 (636 bp)
fragments. In two of the three single digests, the MyoD probe
hybridized to a single band, 6 kb BamH1 or 11 kb EcoR1
fragment. In the HindII digest, two small fragments were detected,
740 bp and 2.5 kb. The double digests also produced very simple hybridization
patterns, consistent with one gene for MyoD. A similar pattern was
observed for myogenin; one fragment hybridized strongly in each of
the digestions. MRF4 hybridized to 4.6 and 2.1 kb fragments in the
BamH1 digest, a 6 kb fragment in the EcoR1, and a 4.6 kb
fragment in the HindIII digest. myf5 hybridized to single
bands in the EcoR1 (6.8 kb) digest, and in the
BamH1/EcoR1 (4.9 kb) and EcoR1/HindIII
(3.0 kb) double digests. Overall, these hybridization patterns are consistent
with a simple organization of each of the four genes, suggesting the presence
of one copy of each gene. Given the wide phylogenetic distribution and
structure conservation (three exons, two introns) of the MRF genes across
animal taxa, S. macrurus MRFs are expected to have two introns. The
cDNA probes may hybridize to two restriction fragments generated by a
restriction site in an intron. Previous northern blot analyses suggest a
single MyoD and myogenin gene
(Kim et al., 2004
). Further,
the full-length coding sequences of all four MRFs were obtained from 5'-
and 3'-RACE fragments whose corresponding cDNA sequences after
amplification showed no evidence suggestive of multiple MRF gene copy number.
Together, the band patterning obtained from the Southern blot analysis is most
easily explained by the presence of single MyoD, myogenin, myf5 and
MRF4 genes in S. macrurus.
|
| DISCUSSION |
|---|
|
|
|---|
MRF transcript levels differ in adult skeletal muscle and EO
Our expression analysis showed that the relative MRF mRNA levels in both
skeletal muscle and EO of S. macrurus follow this pattern:
MyoD>MRF4>myf5>myogenin. This
expression pattern is interesting given that fast muscle fibers give rise to
electrocytes, and MyoD and myogenin are the predominant MRFs in fast
glycolytic and slow oxidative muscle fibers, respectively, in other
vertebrates (Charbonnier et al.,
2002
; Ekmark et al.,
2003
; Hughes et al.,
1993
; Voytik et al.,
1993
; Walters et al.,
2000
; Yutzey et al.,
1990
). Future studies using antibodies specific to S.
macrurus MRF antigens will allow us to compare their expression patterns
across different muscle fiber-type populations in electric fish.
As the relative expression patterns of MRFs were similar in muscle and EO,
it is feasible that different levels of MRF transcript expression affect
distinct aspects of the skeletal muscle program. Quantitative RT-PCR revealed
that with the exception of MyoD, MRF transcript levels in the EO
exceeded those detected in skeletal muscle. These data indicate that the
differentiation of muscle fibers into electrocytes is accompanied by an
up-regulation of myogenin, myf5 and MRF4 that is concurrent with a
down-regulation of subsets of muscle protein systems including sarcomeric and
sarcolemmal genes (Unguez and Zakon,
1998a
). This MRF composition clearly negates the idea that the
manifestation of a partial muscle program in electrocytes is correlated with
MRF transcript expression levels that are lower than those in muscle.
Our analysis of transcript levels does not allow us to draw firm
conclusions about MRF protein activity in electrocytes. Nevertheless, a recent
analysis of randomly selected clones from an EO cDNA library revealed the
presence of desmin, titin, muscle creatine kinase (MCK),
-actin,
-AChR and fast MHC mRNAs (Cuellar
et al., 2006
), genes that are known transcriptional targets of
MRFs (Gilmour et al., 1991
;
Jaynes et al., 1988
; Li and
Capetanaki, 1994; Maleki et al.,
2002
; Simon and Burden,
1993
; Wheeler et al.,
1999
; Yutzey et al.,
1990
). Further, all four S. macrurus MRFs can induce
myotube formation and expression of sarcomeric proteins in mammalian 10T1/2
embryonic cells with similar conversion efficiency to their mammalian
heterologs (Kim et al., 2007
).
Together with our present data in support of S. macrurus having
single copies of MyoD, myogenin, myf5 and MRF4 genes with
highly conserved functional protein domains, we interpret these findings to
indicate that both muscle fibers and electrocytes contain MRF proteins with
similar myogenic functions to those observed in their mammalian counterparts.
Nevertheless, development of antibodies that can be used to detect S.
macrurus MRF proteins will be critical to fully evaluate their role in
the EO and to characterize the mechanism of muscle gene regulation in mature
electrocytes.
We should note that the present MRF expression patterns differ from those
reported previously for muscle and EO in S. macrurus where myogenin,
not MyoD, was the predominant MRF in both tissues
(Kim et al., 2004
). We
consider the present analysis to be a more rigorous assessment of the
endogenous MRF transcript levels because the quantitative assessment of MRFs
was based on muscle and EO samples from five individual animals (vs
quantification of MRFs from pooled muscles and EO samples taken from different
adult fish). Further, real-time RT-PCR (vs competitive RT-PCR) yields
a higher degree of reproducibility without the need for post-PCR processing
and image analysis, which may introduce systemic errors
(Wall and Edwards, 2002
).
The expression of MRF co-regulators MEF2C, Id1 and Id2 is not unique to skeletal muscle or EO in S. macrurus
MRFs are regulated by co-activators and repressors. MEF2 proteins are
co-activators of myogenic differentiation and their interaction with MRFs is
required for the transcription of muscle-specific genes, i.e. MHC
(Molkentin and Olson, 1996
;
Molkentin et al., 1996
). In
vertebrates, MEF2C is the only MEF2 protein that is restricted to the skeletal
muscle, brain and spleen following differentiation
(Martin et al., 1993
;
McDermott et al., 1993
),
whereas MEF2A, B and D proteins are ubiquitously expressed
(Yu et al., 1992
;
Martin et al., 1993
;
McDermott et al., 1993
). A
recent cDNA library screen from the EO of S. macrurus revealed the
presence of MEF2C transcript
(Cuellar et al., 2006
). To
confirm the expression of MEF2C in the EO, and test the hypothesis that the
differential expression of MEF2C is correlated with the muscle and EO
phenotype, a partial fragment of MEF2C was isolated and cloned from
both tissues. Our expression experiments confirmed the presence of
MEF2C transcripts in EO. Hence, our data clearly demonstrate that
expression of positive co-regulators of MRFs does not ensure that an
electrocyte will fully express the skeletal muscle program.
Whether mature electrocytes up-regulate the expression of MRF inhibitors
such as Id proteins was also addressed to further characterize the
transcriptional program in these muscle-derived cells. Id proteins lack the
basic domains necessary for DNA binding
(Murre and Baltimore, 1992
),
and heterodimerize with MRFs to inhibit their transcriptional activity
(Benezra et al., 1990
). Data
from the present study suggest that Id1 and Id2 are the
predominant inhibitory transcripts in S. macrurus, and the two are
transcribed in adult skeletal muscle and EO at relatively similar levels.
Taken together, these data reveal that expression of central players in the
regulation of the skeletal muscle program does not correlate with the level to
which a muscle cell or an electrocyte in S. macrurus manifests the
myogenic program.
Muscle properties in myogenically derived tissues in S. macrurus following changes in electrical activity patterns
Five weeks of electrical inactivation by ST had a differential effect on
the phenotypic properties of muscle and EO. In muscle, there were no
observable differences in the fiber-type composition. Consistent with a
previous study (Unguez and Zakon,
1998b
), these data suggest that skeletal muscle fibers of S.
macrurus are more resistant to changes in MHC isoform composition
compared with mammalian muscle fibers following neural inactivation
(Talmadge et al., 1995
;
Talmadge et al., 1999
). ST
also resulted in the decreased expression of all four MRF transcripts in
muscle, with the greatest effect observed in MyoD mRNA levels.
However, even a 10-fold decrease in MyoD mRNA content in muscle did
not seem to affect its biochemical properties, as the muscle protein profile
appeared unchanged based on the immunolabeling profile before and after ST
(data not shown). This is consistent with previous studies on hindlimb muscles
of rodents showing that changes in MRF expression are not sufficient to induce
changes in muscle fiber-type composition
(Mozdziak et al., 1999
;
Walters et al., 2000
).
We are aware of only one study of vertebrate muscle that also shows a
decrease in MRF expression levels following electrical inactivation. Nicolas
and colleagues reported a marked down-regulation of myf5 and
MRF4 mRNA expression at 11 days after denervation of forelimb muscles
in adult Xenopus (Nicolas et al.,
2000
). Expression of myf5 was only transiently decreased,
whereas MRF4 mRNA levels remained lower than control levels up to 30
days post-denervation. By comparison, MyoD levels were not affected
and myogenin expression increased, but this was not observed before 20 days
post-denervation. In their study (Nicolas
et al., 2000
), little to no change in muscle fiber size was also
observed following the 30 day denervation period. The muscle response to
denervation in Xenopus is somewhat analogous to what we found in
S. macrurus muscle after 5 weeks of ST. Although MRFs have been
isolated from other fish including zebrafish
(Chen et al., 2001
;
Hinits et al., 2007
), carp
(Kobiyama et al., 1998
),
pufferfish (Fernandes et al.,
2007
) and striped bass (Tan et
al., 2002
), the present data represent the first quantitative
analysis of mRNA content of all four MRFs in myogenic tissues of a teleost
vertebrate. Determining whether skeletal muscle in these fish responds to
electrical inactivation in a similar way to S. macrurus and
Xenopus muscle would prove invaluable for elucidating the incidence
of inactivation-induced cellular and molecular correlates in non-mammalian
species.
The data from S. macrurus and Xenopus
(Nicolas et al., 2000
) show a
muscle response that is contrary to that commonly found in mammals. For
example, in rodents, removal of neural input to the hindlimb muscles is
accompanied by rapid and sustained increases in all four MRF transcripts
beginning as little as 24–48 h after denervation
(Voytik et al., 1993
;
Walters et al., 2000
). More
recently, Hyatt and colleagues demonstrated that MyoD and myogenin mRNA levels
increased after either electrical inactivation or denervation of fast- and
slow-twitch skeletal hindlimb muscles, and reached maximum levels between 3
and 28 days after removal of neural input, depending on the muscle
(Hyatt et al., 2003
;
Hyatt et al., 2006
). The
latter studies also showed that once maximum increases in MRF levels are
reached, they decrease over time, but can remain elevated (even up to 1 month
of disruption of nerve–muscle connections) to levels that are
significantly greater than those found in control tissues
(Hyatt et al., 2006
). These
data suggest the possibility that differences in the physiological response of
muscle to removal of neural input may involve a MRF-dependent transcriptional
signaling mechanism that is distinct among vertebrate species. Our
quantitative assessment of mRNA levels was not normalized to cell size –
a parameter that might be relevant. However, we are not aware of any study
that has taken changes in cell size into account when assessing MRF mRNA
levels following changes in neural input. It may be that the physical
connection between the motoneuron and its target cell enables some regulatory
role of the muscle and electrocyte plasticity through activity-independent
mechanisms as some have suggested (Hyatt
et al., 2003
; Roy et al.,
1991
).
Unlike muscle fibers, there were pronounced phenotypic changes in
electrocytes. We observed an up-regulation of MHC, tropomyosin and troponin-T
proteins in many electrocytes, resembling the phenotype of their precursor
skeletal muscle fibers, consistent with previous findings
(Unguez and Zakon, 1998b
).
This reversal of differentiation in electrocytes after 5 weeks of ST is
analogous to the re-expression of embryonic isoforms of contractile proteins
and acetylcholine receptor (nAChR) subunits observed in adult mammalian
muscles when activation patterns are removed
(Buonanno et al., 1998
;
Buonanno and Fields, 1999
;
Salpeter and Loring, 1985
;
Schuetze and Role, 1987
).
Thus, removal of electrical activity from EMNs can trigger transcriptional
and/or translational mechanisms within mature electrocytes. The change in
protein composition of electrocytes is consistent with a suppression of select
features of the muscle program by the high frequency activation pattern
exerted by the EMNs (Unguez and Zakon,
1998b
). The 5 week period of ST also reduced MyoD, but
not myogenin, myf5 or MRF4 transcript levels in the EO. We
interpret our current data to suggest that the 5 week electrical inactivity
period had a greater influence on the expression levels of MyoD, the most
prevalent MRF in myogenically derived tissues in S. macrurus.
| Absence of the full myogenic program in the presence of MRF expression |
|---|
|
|
|---|
| Acknowledgments |
|---|
| Footnotes |
|---|
| References |
|---|
|
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