First published online March 14, 2008
Journal of Experimental Biology 211, 1141-1147 (2008)
Published by The Company of Biologists 2008
doi: 10.1242/jeb.015339
Recruitment of the diaphragmaticus, ischiopubis and other respiratory muscles to control pitch and roll in the American alligator (Alligator mississippiensis)
T. J. Uriona and
C. G. Farmer
Department of Biology, 257 South 1400 East, University of Utah, Salt Lake
City, UT 84112, USA

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Fig. 2. Sample recordings from alligator 2 (body mass 1.22 kg) of change in pitch
(top trace) associated with EMG activity (second trace) in the diaphragmaticus
during ventilation and during a dive. The V below the EMG trace indicates
muscle activity in the diaphragmaticus associated with inspiration. During
this time the alligator's head was level with the water and its body was at a
positive 45° angle as illustrated by the schematic alligator above the
left side of the pitch angle trace. It should be noted that during this
particular ventilation cycle very little change in the pitch angle can be
seen. The D below the EMG trace indicates muscle activity in the
diaphragmaticus associated with a dive. The vertical bars that mark the
beginning of a dive and the subsequent return to the original pitch angle
after surfacing from the dive delimit a dive–surface cycle. The maximum
pitch angel for this dive–surface cycle was reached at around
–45° when the alligator's head was parallel to the surface of the
water and its body assumed the indicated angle as illustrated by the schematic
(upper right side of the inclinometer trace). In order to compare muscle
activity over the course of a dive–surface cycle of different lengths,
the cycle was divided into 100 equal bins and the average integrated muscle
activity for each bin calculated. A sample of how this was done for a cycle is
shown below the EMG trace in this figure. The calibration bar, 1 s.
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Fig. 3. Graphs of timing and intensity of muscle activity during a
dive–surface cycle with the relative muscle activity of each muscle
divided into 100 bins and expressed as means ± s.e.m. for each bin. (A)
Diaphragmaticus, N=7; (B) ischiopubis; N=4; (C) rectus
abdominis, N=4; (D) internal intercostals, N=2.
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Fig. 5. Sample data for two alligators showing timing and intensity of muscle
activity as the average integrated EMG activity divided into 100 bins during a
dive where the animals rolled hard to the right side (clockwise) and to the
left side (counterclockwise). The shaded area in the middle of the graphs
represents the period of time during the dive where the animals rolled to the
right or the left side respectively. An equal period prior to and following
the period of time associated with the roll is shown on either end of the
graphs. The first set of graphs shows muscle activity in the right rectus
abdominis of alligator 2. The second set of graphs shows muscle activity in
the right diaphragmaticus of alligator 5. The third set of graphs shows muscle
activity in the left diaphragmaticus of alligator 5. The final set of graphs
shows muscle activity in the left diaphragmaticus of alligator 2. For both
animals muscle activity can be seen to diminish or stop in left
diaphragmaticus during the period of time that the animal was rolling to the
right and the opposite is seen as the animal rolls to the left. The same trend
can be seen in the right rectus abdominis in alligator 2 and the right
diaphragmaticus in alligator 5. At around 66% of the entire cycle the animal
is no longer diving down and muscle activity stops for all the muscles shown
in both alligators.
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© The Company of Biologists Ltd 2008